Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq249 122 1e-22 >seq249 Length=183263 Score = 122 bits (134), Expect = 1e-22 Identities = 394/600 (66%), Gaps = 14/600 (2%) Strand=Plus/Plus Query 76538 ACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTA 76597 || ||| | | ||| || || || || || ||||| | | |||||| |||| |||| Sbjct 118331 ACGTCAGCAAGACCTGGGCACTCGTTGGGGCACATAAGCGTCCACTCGCCATTCTCCTGG 118390 Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 || || | ||| || ||||| || ||||| || ||| || | || || | | | Sbjct 118391 ACACGCTGCATGAAAAGATCGGGGATCCACAGGGCATAGAACAAGTCGCGAGCACGAACC 118450 Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717 || || || || ||||| | | || ||||| | | | |||| |||||||| Sbjct 118451 TCCTCCTTGCCGTGGTTCTTCCTCAAGTCGAGGAAGCCGAAGACGTCAGCGTGCCATGGC 118510 Query 76718 TCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCA 76777 || || || || || | |||| || || || || || ||||| || | || | ||| Sbjct 118511 TCGAGGTAGATGGCGAACGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCG 118570 Query 76778 GTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAA 76837 ||||| || || || | | ||| || || | ||||| ||||| ||||| ||||| Sbjct 118571 GTGTTGTTGTAGACACGAAGCATAGGGATGAGACCGTTCGATGTTCCATTGGTTCCTCCG 118630 Query 76838 ATATAACTTCCACATGCACGAATAT--TACTAATAGATAGGCCTATTCCTCCTGCCATTT 76895 ||||| ||| |||||||| | | || || | || || || || || | | Sbjct 118631 ATATAGGAGCCAGTGGCACGAATGCGGTGCACATTGAGA--CCAATACCGCCAGCAGTCT 118688 Query 76896 TAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCA 76955 | ||||| | ||||| ||||||||||| ||||| || || || || || ||| ||| Sbjct 118689 TGGAGATCAACGCACAAGTCTTCAATGTGTCGTAGATACCGTCAATGCTGTCTTCCTTCA 118748 Query 76956 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGA-ACAGTTCCTGCATTAAACAATGTA 77014 ||| | || || || |||||||| || || || || || || || | || Sbjct 118749 TGTCGATGAGGAAGCAAGATGACATTTG-TGGGGATGGTGTGCCCGCGTTGAAGAGCGTC 118807 Query 77015 GGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTC 77073 || || || || ||||| | |||| || | |||| | |||||| || || | |||| Sbjct 118808 GGCGACGCGTGTGTGAAGTACTTTTGCGACATGTAG-TCGTATGTCTCGATGGC--CTTC 118864 Query 77074 T--ATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 | || ||| | || || || || |||||||| ||||| | ||| ||||| || ||||| Sbjct 118865 TCAATGTCCTCCATG-TGGATACCAACAGCGACGCGCATGAGCATGTGCTGTGGGCGTTC 118923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931387852160