Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq53 111 4e-19 >seq53 Length=112647 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || |||||||| || || ||||||||||| || | || || | Sbjct 69905 GAGACGGAGTACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGCGTACG 69964 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || |||||||| || | ||||||||| | | ||| || || Sbjct 69965 GCCGTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTC 70024 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || |||||| | || | | | || || ||| || ||||| || Sbjct 70025 CTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTATCCGACGACTCAACCTCAAGGGT 70084 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || || ||||| ||||||| ||||| Sbjct 70085 AATGGTCTTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 70123 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| |||| || || | |||||| Sbjct 70140 AGGACAAGGTGTAGTGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGGCCATCT 70199 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | |||||| || | | ||| || ||||| ||| Sbjct 70200 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATACCCTCCTTGTCT 70259 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | | | || || ||| ||||| ||||| || || Sbjct 70260 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGGATGACTCGACTTCGAGAGTGATGGTC 70319 Query 152073 TTGCCCGT 152080 ||||| || Sbjct 70320 TTGCCGGT 70327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815803234798