Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq53 129 4e-25 seq170 91.5 1e-13 seq136 89.7 4e-13 >seq53 Length=112647 Score = 129 bits (142), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| ||||| |||||| ||||| ||||| || | |||| ||| | || || Sbjct 69686 CACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAGTCCGAGAGTGTGCGACCATCCTC 69745 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || |||||||| | ||||||||| || | || | || ||||| ||| Sbjct 69746 CAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTG 69805 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | ||||| || | || || ||||| | ||||| ||| Sbjct 69806 AATCTTGGACTTGACATTGT--CAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTC 69863 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || |||||||| |||||||||||||| Sbjct 69864 TTGCCTGTCAGGGTCTTGACGAAGATTTGCAT 69895 Score = 109 bits (120), Expect = 4e-19 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || ||||| ||||||||||| || | || || |||| ||| Sbjct 69915 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGCGTACGGCCGTCTTCC 69974 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||||||||| || | || | || ||||| ||| Sbjct 69975 AGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGA 70034 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | ||||| || | || || ||||| | ||||| |||| Sbjct 70035 ATCTTGGACTTGACATTGT--CAATGGTATCCGACGACTCAACCTCAAGGGTAATGGTCT 70092 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||||||| |||||||||||||| Sbjct 70093 TGCCTGTCAGGGTCTTGACGAAGATTTGCAT 70123 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| ||||| ||||| || | || || | || || Sbjct 70427 ACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAAAGGGTACGACCATCCTCA 70486 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||||| |||||||| || | ||| | |||||||| ||| Sbjct 70487 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGA 70546 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| || |||||||| | || |||||||| Sbjct 70547 ATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTG 70606 Query 44309 CCCGTGA 44315 || |||| Sbjct 70607 CCGGTGA 70613 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || ||||| || ||| |||||| ||||||||||| |||| | || | ||| | || || Sbjct 70143 ACAAGGTGTAGTGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGT-GCGGCCATCTTC 70201 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || |||||||| ||||||||||| | ||| | ||| ||||| || Sbjct 70202 GAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATACCCTCCTTGTCTTG 70261 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | ||||| |||| || || || || | || || ||||| Sbjct 70262 GATCTTGCTCTTGACGTTGTCGATGGTATCGGATGACTCGACTTCGAGAGTGATGGTCTT 70321 Query 44308 TCCCGT 44313 || || Sbjct 70322 GCCGGT 70327 >seq170 Length=170908 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| ||||||||||| |||| || ||| |||| || Sbjct 129689 ACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCGTCCTCA 129748 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| |||||||| || | || | |||||||| ||| Sbjct 129749 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGG 129808 Query 44249 ATCTT 44253 ||||| Sbjct 129809 ATCTT 129813 >seq136 Length=202766 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || ||||||||| ||||| |||||| ||||||||||| |||| Sbjct 67032 CCACCACGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 66973 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||| ||||||| ||||||||| || | || Sbjct 66972 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGA 66913 Query 44231 ACACCTTCCTTTTC 44244 | || ||||| || Sbjct 66912 ATGCCCTCCTTGTC 66899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988917064546