Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ascochyta_20rabiei_20[genbank_20GCA_5F001630375.1_202016-04-19] 338 sequences; 34,658,250 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq136 131 2e-25 seq170 127 2e-24 seq53 107 2e-18 >seq136 Length=202766 Score = 131 bits (144), Expect = 2e-25 Identities = 111/137 (81%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | |||||| || ||||| ||||||||| ||||| |||||| Sbjct 67035 CCACCACCACGCAGGCGCAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 66976 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 || || ||||| | || |||||||||||||||||||| ||||| ||||| ||||||| | Sbjct 66975 GAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGG 66916 Query 41753 GGAACGCTCTCCTTGTC 41769 |||| || ||||||||| Sbjct 66915 GGAATGCCCTCCTTGTC 66899 >seq170 Length=170908 Score = 127 bits (140), Expect = 2e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| |||||||| Sbjct 129671 CCACCACGGAGACGAAGGACCAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 129730 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||||||||| |||| |||||| ||||||| |||| Sbjct 129731 AGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 129790 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || ||||||||| ||| || Sbjct 129791 ATGCCTTCCTTGTCCTGGATCTT 129813 >seq53 Length=112647 Score = 107 bits (118), Expect = 2e-18 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||| || | || || || || ||| ||||||||| || || ||||| || Sbjct 70409 CCACCACGTAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGAA 70468 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||||||||| || ||||||||||| ||||| | ||| Sbjct 70469 AGGGTACGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGA 70528 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| | ||||| | ||| | | | |||||| ||||||| Sbjct 70529 ATGCCTTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATGGTGTCGGAAGACTCCA 70586 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || ||||| || || || Sbjct 70587 CCTCGAGGGTGATCGTCTTGCCGGT 70611 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || |||| || || || || ||| ||||||||| ||||| |||||||| Sbjct 70125 CCACCACGCAGGCGTAGGACAAGGTGTAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAC 70184 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || |||||||||||||| ||||| |||| |||||| || || | || Sbjct 70185 AAGGTGCGGCCATCTTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGG 70244 Query 41756 ACGCTCTCCTTGTC 41769 | | ||||||||| Sbjct 70245 ATACCCTCCTTGTC 70258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302046765600