Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq10 141 2e-28 seq6 89.7 1e-12 >seq10 Length=610536 Score = 141 bits (156), Expect = 2e-28 Identities = 174/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473 |||||||| | ||||||| | || ||| || | ||||||||| || | || ||| Sbjct 110017 AGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGATGT 109958 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 | ||||||||||| ||||| || |||||| | || || || ||||| || |||| | Sbjct 109957 GCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGGCAACAAGAAGTACT 109898 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 ||||| | | ||||||||| | || |||||| || ||||| || |||||||||| Sbjct 109897 ACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACT 109838 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648 |||| || ||||| || ||||||| |||| | ||||||| ||| ||| |||||| Sbjct 109837 TCTTTGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGA 109781 >seq6 Length=3949434 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 319451 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 319510 ||||||| ||| ||| ||||| || |||||||||| ||||||||||| || || | Sbjct 2572153 GTTCGTAGTGGTAGATATCCGTGCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAGACGA 2572212 Query 319511 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACA 319570 ||| | | | || | | || ||||||| || | |||| | ||||| | || Sbjct 2572213 TCAAACTGGTGATATCGGTGTGCTTCTTCAGGTACTCCTGGAGCCACTTGACGTTGGCCA 2572272 Query 319571 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCAC 319630 || | ||||| || || ||||| || || || | | || || | ||||| |||| Sbjct 2572273 CATCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCAC 2572332 Query 319631 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | || |||||||| ||||| ||||| ||||| || || Sbjct 2572333 GCGCCAGAGCGAGCTTCATCTTCCAACCTCCAGACAG 2572369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823525632050