Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq10 141 2e-28
seq6 89.7 1e-12
>seq10
Length=610536
Score = 141 bits (156), Expect = 2e-28
Identities = 174/237 (73%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGG 230473
|||||||| | ||||||| | || ||| || | ||||||||| || | || |||
Sbjct 110017 AGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGATGT 109958
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
| ||||||||||| ||||| || |||||| | || || || ||||| || |||| |
Sbjct 109957 GCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGGCAACAAGAAGTACT 109898
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
||||| | | ||||||||| | || |||||| || ||||| || ||||||||||
Sbjct 109897 ACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACT 109838
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648
|||| || ||||| || ||||||| |||| | ||||||| ||| ||| ||||||
Sbjct 109837 TCTTTGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGA 109781
>seq6
Length=3949434
Score = 89.7 bits (98), Expect = 1e-12
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 319451 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 319510
||||||| ||| ||| ||||| || |||||||||| ||||||||||| || || |
Sbjct 2572153 GTTCGTAGTGGTAGATATCCGTGCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAGACGA 2572212
Query 319511 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACA 319570
||| | | | || | | || ||||||| || | |||| | ||||| | ||
Sbjct 2572213 TCAAACTGGTGATATCGGTGTGCTTCTTCAGGTACTCCTGGAGCCACTTGACGTTGGCCA 2572272
Query 319571 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCAC 319630
|| | ||||| || || ||||| || || || | | || || | ||||| ||||
Sbjct 2572273 CATCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCAC 2572332
Query 319631 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| || |||||||| ||||| ||||| ||||| || ||
Sbjct 2572333 GCGCCAGAGCGAGCTTCATCTTCCAACCTCCAGACAG 2572369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823525632050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |