Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
seq5 96.9 3e-15
>seq1
Length=6182763
Score = 98.7 bits (108), Expect = 8e-16
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870
|||||| ||||| || ||||| ||||| || | ||||| || ||||| ||| || |
Sbjct 808732 GTTGCCAAGGTCACCAACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 808791
Query 23871 GGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 23930
|||||| ||||| |||||||| |||||||||||| || |||| ||||| | ||| ||
Sbjct 808792 GGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 808851
Query 23931 GTGAAAACC 23939
||| || ||
Sbjct 808852 GTGGAAGCC 808860
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| || | ||||||||||| || ||||| |||||||
Sbjct 4512381 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 4512440
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || ||||||| ||||| || || || | || || | ||||||||| |||
Sbjct 4512441 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 4512500
Query 21069 ACGCCTTCCTTGTC 21082
| || ||||||||
Sbjct 4512501 ATACCCTCCTTGTC 4512514
>seq5
Length=3972810
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
|||||| || || || | |||||||| |||| |||| |||||| || ||||| |||||
Sbjct 3010240 GTTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC 3010299
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || || | | || |||||||| || || || |||| || | |||||| |||
Sbjct 3010300 GGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGG 3010359
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
||| | ||| ||||| || |||||| | || || | | | |||||| | |||
Sbjct 3010360 GGGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTC 3010419
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| || | ||||| ||||||||||| | || || || || || |||||
Sbjct 3010420 CACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470
Score = 96.9 bits (106), Expect = 3e-15
Identities = 133/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
|||||| |||||||| ||||| ||||| | |||||| || | ||||||||||| || ||
Sbjct 3010729 AGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCC 3010788
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | || || | ||||||||| || | ||| |||||||| ||||| ||
Sbjct 3010789 CGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTT 3010848
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
||| | | ||| ||| ||| | |||| || | ||| || ||||| ||||| | ||
Sbjct 3010849 CACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAGGGT 3010908
Query 21158 TTTGAC 21163
|||||
Sbjct 3010909 CTTGAC 3010914
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||| || | || | ||| |||||||| || ||||| ||||| | |
Sbjct 3011002 CCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3011061
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||||||||| || || || | || || | ||||||||| ||
Sbjct 3011062 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGG 3011121
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| ||||| | | |||
Sbjct 3011122 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACC 3011181
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | ||| ||||||||||||||
Sbjct 3011182 TCGAGGGTGATGGTCTTGCCGGT 3011204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259019880060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |