Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5 125 6e-24 seq2 107 2e-18 seq1 98.7 9e-16 >seq5 Length=3972810 Score = 125 bits (138), Expect = 6e-24 Identities = 139/182 (76%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| |||||||| || || |||||||| || || || || |||||| ||||| Sbjct 3011025 GTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTG 3011084 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTT 118653 ||||||||| |||| ||||||||||| |||||||| ||||||||||||| ||| | | Sbjct 3011085 CTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGA--TC 3011142 Query 118654 TTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCG 118712 || || ||||| | |||| ||| || | ||||||||||| ||| | || |||||| Sbjct 3011143 TTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCG 3011202 Query 118713 GT 118714 || Sbjct 3011203 GT 3011204 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||| || || |||||||| ||| | || || ||| || Sbjct 3010261 CACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTC 3010320 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || |||||| | ||||||||||||||||| || || ||||||||||| ||| Sbjct 3010321 CAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTG 3010380 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || | || || | || | || |||| |||||| ||||| | || | ||| || Sbjct 3010381 GATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTCTT 3010440 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || |||||||| Sbjct 3010441 GCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || ||||| |||||||| || || || || |||||| ||||| ||||| Sbjct 3010730 GTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCC 3010789 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||||||||||||||| |||||||| |||||||||||||| ||| || || Sbjct 3010790 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTC 3010849 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | ||| ||||| | ||| | || || |||||||| || Sbjct 3010850 ACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAGGGTC 3010909 Query 118722 TTTAC 118726 || || Sbjct 3010910 TTGAC 3010914 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || ||||||||||| ||| || || || |||||| ||||| || ||| Sbjct 3010502 GTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCA 3010561 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | ||||||||| || || || ||||| ||||||||| ||| || ||| Sbjct 3010562 GCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTA 3010621 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | || || || | || | ||| || || || ||||| Sbjct 3010622 ACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTC 3010681 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 3010682 TTGACGAAGATCTGCAT 3010698 >seq2 Length=4967832 Score = 107 bits (118), Expect = 2e-18 Identities = 135/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||| ||||| || |||||| |||| Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 |||||||||||||| || || || |||||||||| ||| | | || || || || | | Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 3523972 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || || || || || || | Sbjct 3523971 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 3523912 Query 118729 AA 118730 || Sbjct 3523911 AA 3523910 >seq1 Length=6182763 Score = 98.7 bits (108), Expect = 9e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| || | ||| || ||||| Sbjct 4512398 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 4512457 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 |||||| || |||||| |||| ||||||||||| ||||| || || ||||||||||||| Sbjct 4512458 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTG 4512516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830214944220