Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq5 127 1e-24 seq1 89.7 3e-13 >seq5 Length=3972810 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||||||| ||| | ||| || || ||||| |||||||||||||| Sbjct 3010243 TCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 3010302 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| ||| | || |||| |||||| || ||||||||||| |||||||| || ||| Sbjct 3010303 GAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGG 3010362 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||| || ||||| | ||| | | | || | ||| | || || Sbjct 3010363 AATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCAC 3010422 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||| || || ||||||||||| || ||||| ||||||||||| Sbjct 3010423 CTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 122 bits (134), Expect = 6e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | |||| || ||||| ||||||||||| ||| Sbjct 3011002 CCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3011061 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| |||||| || ||||| || || |||||||||||| || Sbjct 3011062 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGG 3011121 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| |||| ||||| Sbjct 3011122 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACC 3011181 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 3011182 TCGAGGGTGATGGTCTTGCCGGTGA 3011206 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||||||||||| |||| | || |||| |||||| || || || Sbjct 3010507 TTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAA 3010566 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | ||||||||||| ||| | || |||||||| ||||| ||| | | Sbjct 3010567 GATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTT 3010626 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| ||||| || |||| ||||| || || || || ||||| || || Sbjct 3010627 ATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGAC 3010686 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 3010687 GAAGATCTGCAT 3010698 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| ||| || || ||||||||||| ||||| |||| | || Sbjct 3010715 AGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 3010774 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || ||||| ||||| |||||||||||| || | || ||||||||| Sbjct 3010775 TCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3010834 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || || || || | ||||| || Sbjct 3010835 TGAATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 3010894 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 || ||||| || || || || Sbjct 3010895 TTTCCGGTCAGGGTCTTGAC 3010914 >seq1 Length=6182763 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||||||| | || || ||||| ||||||||||| || Sbjct 4512381 CCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 4512440 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | |||||| || ||||| || || |||||||||||| ||| Sbjct 4512441 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 4512500 Query 34283 ACGCTCTCCTTGTC 34296 | | ||||||||| Sbjct 4512501 ATACCCTCCTTGTC 4512514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071862189600