Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 >seq5 Length=3972810 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| |||||||||||||| |||||||||||| || || | || ||| Sbjct 3010262 ACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCC 3010321 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| || | ||||| || || || || | |||||||| || Sbjct 3010322 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGG 3010381 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || | ||| || | | | ||| | ||||||||| | |||||||||||| Sbjct 3010382 ATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTCTTG 3010441 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| ||||| ||||| Sbjct 3010442 CCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||||||||||||| || || | || ||||| || || || || || Sbjct 3010508 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAG 3010567 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| ||||| ||||| || || | || |||||||| ||| || |||||| Sbjct 3010568 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 3010627 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | || || |||| || |||||||| ||||| |||||||| || Sbjct 3010628 TCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACG 3010687 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 3010688 AAGATCTGCAT 3010698 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||| || ||||||||||| ||| || | || ||||| || Sbjct 3010723 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTG 3010782 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| ||||| || | ||||| ||||||||||| | |||||||||||| ||| || Sbjct 3010783 CTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 3010842 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | |||| | ||||||||| | ||| || ||||| || || Sbjct 3010843 GGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGT 3010902 Query 45313 CAGAGTCTTCAC 45324 ||| ||||| || Sbjct 3010903 CAGGGTCTTGAC 3010914 Score = 82.4 bits (90), Expect = 6e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| ||| || | || ||||| || ||||| ||||| Sbjct 3011037 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAA 3011096 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||||||||| | |||||||||||| || || |||||| Sbjct 3011097 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTT 3011156 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | | | | || | ||| ||||| | ||| || |||||||| || Sbjct 3011157 GTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 3011204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075031475735