Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 248 8e-61
seq10 129 5e-25
>seq5
Length=3972810
Score = 248 bits (274), Expect = 8e-61
Identities = 438/636 (69%), Gaps = 2/636 (0%)
Strand=Plus/Plus
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
||||| || |||| || |||||||| |||| || ||||||||||| || || || |
Sbjct 1661228 TCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGCTCTG 1661287
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
|||||||| || ||| |||||| | ||||| || || || || |||| |||||
Sbjct 1661288 ACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAG 1661347
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
||||| ||||| | ||| || || || || | ||| ||||| ||||| || ||||| | |
Sbjct 1661348 GGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTG 1661407
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581
|| ||||||||| | || | ||||| || || ||||||||||| | ||| | ||
Sbjct 1661408 GCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCG-TTGGTACC 1661466
Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640
||| | || || | | || | | ||| |||| | ||| || || ||| |||
Sbjct 1661467 ACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGT 1661526
Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||| ||||| ||||||||||||||||| || || ||||||||||| ||
Sbjct 1661527 CTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTT 1661586
Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760
| |||| | ||| || || | | || | | ||| ||| | || |||||| ||
Sbjct 1661587 CATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGT 1661646
Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820
|||| |||||| || ||||| | ||||| | ||||| || |||||||| ||
Sbjct 1661647 CGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTC 1661706
Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880
|||||| ||||| ||||| | ||| || ||||||| || || || || | ||| |
Sbjct 1661707 AATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGC 1661766
Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940
| ||||| || ||||| || || || | || || || || || || |||
Sbjct 1661767 CACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCTTGAAACCGAAGAAGTT 1661826
Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
||||| || ||||| |||| || || ||||| ||
Sbjct 1661827 GTAGTTGAAATCACGGTCGTATACAATAGCCGAGTT 1661862
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| |||||||| || || || |||||||| | || |||||| | |||
Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| |||| | | || ||| | | ||||||||||| | || || |||||
Sbjct 3010638 GACACCATCGATAACGTTAAGACCAAGATTCAAG-ACAAGGAAGGCATTCCCCCGGACCA 3010580
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||| | || || ||||| || ||| |||| || || || ||| || ||
Sbjct 3010579 GCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAA 3010520
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||| || |||||||| ||||| || || ||| | || | || ||||
Sbjct 3010519 CATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 3010470
Score = 102 bits (112), Expect = 7e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| ||||| || || || |||||| | || || || | || |||| | |||
Sbjct 3010916 TCGTCAAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCG 3010857
Query 31263 AAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
| | || || || ||| | ||||||||| ||| | || |||||||||||||||||
Sbjct 3010856 ACAATGTGAAGACCAAGATTCA-GGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTC 3010798
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| ||||| || || ||| |||| || || || || || ||||| |||||
Sbjct 3010797 ATCTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAG 3010738
Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| |||||||| || || ||| | || | || ||||
Sbjct 3010737 GAATCCACTCTTCACCTCGTCCTTCGTCTTCGTGGTGGTA 3010698
>seq10
Length=610536
Score = 129 bits (142), Expect = 5e-25
Identities = 331/498 (66%), Gaps = 26/498 (5%)
Strand=Plus/Minus
Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTC 57965
|| ||||||||||| || ||| | ||||| ||||| | | || || | || |||
Sbjct 110312 ATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCA---GGACAGGGAATCTACCTTC 110256
Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025
|| || | || | || ||||| ||||| || ||||| ||||| || || ||| ||
Sbjct 110255 GCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCT 110196
Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085
| || || ||| | ||||| || || || ||||| || ||||| || ||||||| |
Sbjct 110195 TCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTC 110136
Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145
|| || || || |||||||| || || || || || ||||| ||| ||| ||| |
Sbjct 110135 ATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCACCT---- 110080
Query 58146 AATAAACCGACGCGGGATCGCATCTT-----GGACATTATCACCGAGGCGGTCGCGATCG 58200
| ||||| | | | | ||| || |||||| ||| |||||| |||| || |
Sbjct 110079 GAACAACCGCCCCAGCA-AGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTG 110021
Query 58201 AAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGA 58260
| | ||||| | || || || || || || |||| || |||||| | | |||
Sbjct 110020 AGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGA 109961
Query 58261 TGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-----AGA 58315
||| ||||||| ||||| || || ||| | || ||| | | | |||| |||
Sbjct 109960 TGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCC---TTGGCAACAAGA 109904
Query 58316 GCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAA 58375
|| | |||||| | | || || || || || ||| | ||||||||| | ||| ||
Sbjct 109903 -AGT-ACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAA 109846
Query 58376 GACAAACTTTTTCGAAAA 58393
||| ||||| || || ||
Sbjct 109845 GACCAACTTCTTTGAGAA 109828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766204977200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |