Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 248 8e-61 seq10 129 5e-25 >seq5 Length=3972810 Score = 248 bits (274), Expect = 8e-61 Identities = 438/636 (69%), Gaps = 2/636 (0%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || |||||||| |||| || ||||||||||| || || || | Sbjct 1661228 TCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGCTCTG 1661287 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 |||||||| || ||| |||||| | ||||| || || || || |||| ||||| Sbjct 1661288 ACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAG 1661347 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| ||||| | ||| || || || || | ||| ||||| ||||| || ||||| | | Sbjct 1661348 GGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTG 1661407 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| | || | ||||| || || ||||||||||| | ||| | || Sbjct 1661408 GCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCG-TTGGTACC 1661466 Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 ||| | || || | | || | | ||| |||| | ||| || || ||| ||| Sbjct 1661467 ACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGT 1661526 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| ||||| ||||||||||||||||| || || ||||||||||| || Sbjct 1661527 CTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTT 1661586 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | |||| | ||| || || | | || | | ||| ||| | || |||||| || Sbjct 1661587 CATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGT 1661646 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 |||| |||||| || ||||| | ||||| | ||||| || |||||||| || Sbjct 1661647 CGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTC 1661706 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 |||||| ||||| ||||| | ||| || ||||||| || || || || | ||| | Sbjct 1661707 AATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGC 1661766 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | ||||| || ||||| || || || | || || || || || || ||| Sbjct 1661767 CACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCTTGAAACCGAAGAAGTT 1661826 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 ||||| || ||||| |||| || || ||||| || Sbjct 1661827 GTAGTTGAAATCACGGTCGTATACAATAGCCGAGTT 1661862 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || |||||||| | || |||||| | ||| Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | || ||| | | ||||||||||| | || || ||||| Sbjct 3010638 GACACCATCGATAACGTTAAGACCAAGATTCAAG-ACAAGGAAGGCATTCCCCCGGACCA 3010580 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || ||||| || ||| |||| || || || ||| || || Sbjct 3010579 GCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAA 3010520 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || |||||||| ||||| || || ||| | || | || |||| Sbjct 3010519 CATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGTA 3010470 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || |||||| | || || || | || |||| | ||| Sbjct 3010916 TCGTCAAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCG 3010857 Query 31263 AAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | | || || || ||| | ||||||||| ||| | || ||||||||||||||||| Sbjct 3010856 ACAATGTGAAGACCAAGATTCA-GGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTC 3010798 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| || || ||| |||| || || || || || ||||| ||||| Sbjct 3010797 ATCTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAG 3010738 Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| || || ||| | || | || |||| Sbjct 3010737 GAATCCACTCTTCACCTCGTCCTTCGTCTTCGTGGTGGTA 3010698 >seq10 Length=610536 Score = 129 bits (142), Expect = 5e-25 Identities = 331/498 (66%), Gaps = 26/498 (5%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTC 57965 || ||||||||||| || ||| | ||||| ||||| | | || || | || ||| Sbjct 110312 ATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCA---GGACAGGGAATCTACCTTC 110256 Query 57966 GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCG 58025 || || | || | || ||||| ||||| || ||||| ||||| || || ||| || Sbjct 110255 GCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCT 110196 Query 58026 GCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTG 58085 | || || ||| | ||||| || || || ||||| || ||||| || ||||||| | Sbjct 110195 TCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTC 110136 Query 58086 ATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC 58145 || || || || |||||||| || || || || || ||||| ||| ||| ||| | Sbjct 110135 ATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCACCT---- 110080 Query 58146 AATAAACCGACGCGGGATCGCATCTT-----GGACATTATCACCGAGGCGGTCGCGATCG 58200 | ||||| | | | | ||| || |||||| ||| |||||| |||| || | Sbjct 110079 GAACAACCGCCCCAGCA-AGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTG 110021 Query 58201 AAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGA 58260 | | ||||| | || || || || || || |||| || |||||| | | ||| Sbjct 110020 AGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGA 109961 Query 58261 TGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-----AGA 58315 ||| ||||||| ||||| || || ||| | || ||| | | | |||| ||| Sbjct 109960 TGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCC---TTGGCAACAAGA 109904 Query 58316 GCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAA 58375 || | |||||| | | || || || || || ||| | ||||||||| | ||| || Sbjct 109903 -AGT-ACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAA 109846 Query 58376 GACAAACTTTTTCGAAAA 58393 ||| ||||| || || || Sbjct 109845 GACCAACTTCTTTGAGAA 109828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766204977200