Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq5 161 1e-34
seq10 116 5e-21
>seq5
Length=3972810
Score = 161 bits (178), Expect = 1e-34
Identities = 579/899 (64%), Gaps = 10/899 (1%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
||||||||||| || | |||| |||| | ||| ||| | || || | || | |
Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || |||| ||| || || ||||| || ||||| || |||| || || ||
Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | ||| ||||| || || ||||| ||||| |||||| | |
Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
| ||| || ||||| || || | ||| ||||| | | || || || ||||| || |||
Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | |||||| || ||||| || | || | | ||| |||| || |||||| ||
Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGAC 63546
|||| |||||||| || ||| ||| | | ||| || | | || ||||
Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT--CAGAC 1661510
Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606
| || || || ||| | || ||||| | ||||| || | ||||| ||||| || |
Sbjct 1661511 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGT 1661570
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666
| ||||| || || |||||| | || || || | | ||| | | | ||| |
Sbjct 1661571 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTAC 1661630
Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726
| || || || | || || || ||||| || || | || | ||| | | ||||| |
Sbjct 1661631 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 1661690
Query 63727 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63786
|||| || || || || || | || || || || || |||||||| | || ||
Sbjct 1661691 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGT 1661750
Query 63787 GCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63846
|||| || | ||| | | || ||| || ||||| |||||| |||||||| |
Sbjct 1661751 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCT 1661810
Query 63847 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTT 63904
| ||||| || ||||||| ||||| || || ||||| | |||| |||| ||||| |
Sbjct 1661811 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 1661868
Query 63905 ATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCC 63964
||| || ||| ||| ||| || || |||| || || || | | |
Sbjct 1661869 ATCGGCATGTTTCATAATTATTTCGTATGTCTCCTTTGATATCATTGGTGCAGGAGCATT 1661928
Query 63965 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttG 64023
||||| || || ||||||| | | | ||| || || || | || | || || |
Sbjct 1661929 GTTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGAC-CAACGAGAACTGCTTCTTGG 1661987
Query 64024 TTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082
| | |||||| || || || | ||| || | ||| || ||||| || ||||| || |||
Sbjct 1661988 TCTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATAGCGTAATCAGGGTGT 1662046
>seq10
Length=610536
Score = 116 bits (128), Expect = 5e-21
Identities = 157/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || ||||| ||| |||||||||||| || | | || | ||||| ||
Sbjct 110089 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAG 110148
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || || ||||| || |||||||| || ||||| || ||||||||||| || |||
Sbjct 110149 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 110208
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCG 33749
|| ||||| || || || || ||||| || |||| || | || | | | |
Sbjct 110209 GAGAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 110268
Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33787
||||| || |||||||| |||||||||||||||||
Sbjct 110269 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 110306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817324454800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |