Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 158 2e-33 >seq5 Length=3972810 Score = 158 bits (174), Expect = 2e-33 Identities = 471/723 (65%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 ||||||||||| || | |||| |||| ||||| ||| | || || | || | | Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| ||| || || ||||| || ||||| || |||| || || || Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| | | ||| ||||| || || ||||| ||||| |||||| | | Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 | ||| | ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 || || | |||||| || ||||| || | || | | ||| |||| || ||| ||||| Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGAC 66339 ||||| ||||| || || ||| ||| | | ||| || | | || |||| Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT--CAGAC 1661510 Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 66399 | || || || ||| | || ||||| | ||||| || | || || ||||| || | Sbjct 1661511 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGT 1661570 Query 66400 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 66459 | || || || ||| |||||| | || || || | | ||| | | ||| | Sbjct 1661571 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTAC 1661630 Query 66460 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 66519 | || || || | || || || ||||| || || | || | ||| | | ||||| | Sbjct 1661631 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 1661690 Query 66520 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 66579 |||| || || || || || | || || || || || |||||||| | || || Sbjct 1661691 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGT 1661750 Query 66580 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 66639 |||| || | ||| | | ||| ||| || ||||| |||||| |||||||| | Sbjct 1661751 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCT 1661810 Query 66640 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 66697 | ||||| || ||||||| ||||| || || ||||| | |||| |||||||||||| Sbjct 1661811 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 1661868 Query 66698 ATC 66700 ||| Sbjct 1661869 ATC 1661871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172512049400