Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq10 104 2e-17 >seq10 Length=610536 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||||| |||||| | ||||| | || |||||| | ||| | || ||||| Sbjct 110036 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGC 109977 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||| | | |||||||| ||||||||||||| || |||||| | |||||| || Sbjct 109976 ATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCC 109917 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 || || | ||| ||||| || || |||||||| || ||| | || ||| Sbjct 109916 CTTGGCAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCG 109857 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||| || || ||||| || |||| || ||||| || ||| Sbjct 109856 CTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTAC 109812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063782972000