Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 167 3e-36 seq10 116 5e-21 >seq5 Length=3972810 Score = 167 bits (184), Expect = 3e-36 Identities = 473/723 (65%), Gaps = 8/723 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | || ||||| ||||| || || | || | | Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | ||| || || ||||| || ||||| || |||| || || || Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | | ||| |||||| || || ||||| ||||| |||||| | | Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | ||| || ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | |||||| || ||||| || | || | | ||| |||| || ||| ||||| Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 80218 ||||| ||||| || || ||| ||| | | ||| || | | || |||| Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT--CAGAC 1661510 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | || || || ||| | || ||||| | ||||| || | || || ||||| || | Sbjct 1661511 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGT 1661570 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338 | ||||| || || |||||| | || || || | | ||| | | ||| | Sbjct 1661571 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTAC 1661630 Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398 | || || || | || || || ||||| || || | || | ||||| | ||||| | Sbjct 1661631 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 1661690 Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458 |||| || || || || || | || || || || || |||||||| | || || Sbjct 1661691 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGT 1661750 Query 80459 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTT 80518 |||| || | ||| | | ||| || || ||||| ||| || |||||||| | Sbjct 1661751 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCT 1661810 Query 80519 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTT 80576 | ||||| || ||||||| ||||| || || ||||| | |||| |||||||||||| Sbjct 1661811 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 1661868 Query 80577 ATC 80579 ||| Sbjct 1661869 ATC 1661871 >seq10 Length=610536 Score = 116 bits (128), Expect = 5e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || ||||| ||| |||||||||||| || | | || || |||||||| Sbjct 110089 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAG 110148 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || |||||||| || ||||| || ||||| || || || || Sbjct 110149 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 110208 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || ||||| || || || || || || || ||||| || | || | | | | | Sbjct 110209 GAGAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 110268 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| || |||||||| ||||||||||||||||| Sbjct 110269 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 110306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268485757400