Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 6e-33
seq10 104 3e-17
>seq5
Length=3972810
Score = 156 bits (172), Expect = 6e-33
Identities = 578/899 (64%), Gaps = 10/899 (1%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
||||||||||| || | ||| | || ||||| ||| || || || | || | |
Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
|| || || | | | || || ||||| || ||||| || |||| || || ||
Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123
||||| | | ||| |||||| || || ||||| ||||| |||||| | |
Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332
Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183
| ||| || ||||| || || | ||| ||||| | | || || || ||||| || |||
Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392
Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243
|| || | |||||| || ||||| || | || | | ||| |||| || ||| |||||
Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452
Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGAC 72301
| ||| ||||| || || ||| ||| | | ||| || ||| || ||||
Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT--CAGAC 1661510
Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 72361
| || || || ||| | || ||||| | ||||| || | || || ||||| || |
Sbjct 1661511 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGT 1661570
Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 72421
| || || || ||| |||||| | || || || | | ||| | | ||| |
Sbjct 1661571 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTAC 1661630
Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 72481
| || || || | || || || ||||| || || | || | ||||| | ||||| |
Sbjct 1661631 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 1661690
Query 72482 TCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541
|||| || || || || || | || || || || || |||||||| | || |
Sbjct 1661691 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGT 1661750
Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601
|||| || | ||| | | ||| || || ||||| |||||| |||||||| |
Sbjct 1661751 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCT 1661810
Query 72602 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTT 72659
| ||||| || ||||||| ||||| || || ||||| | |||| |||| |||||||
Sbjct 1661811 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 1661868
Query 72660 ATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCC 72719
||| || ||| ||| ||| || || |||| || || || | | |
Sbjct 1661869 ATCGGCATGTTTCATAATTATTTCGTATGTCTCCTTTGATATCATTGGTGCAGGAGCATT 1661928
Query 72720 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttG 72778
||||| || || ||||||| | | | ||| || || || | || | || || |
Sbjct 1661929 GTTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGAC-CAACGAGAACTGCTTCTTGG 1661987
Query 72779 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837
| | |||||| || || || ||||| || | ||| || ||||| || ||||| || |||
Sbjct 1661988 TCTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATAGCGTAATCAGGGTGT 1662046
>seq10
Length=610536
Score = 104 bits (114), Expect = 3e-17
Identities = 154/218 (71%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || || ||||| ||| ||||||||||||||| | | || | ||||||||
Sbjct 110089 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAG 110148
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| || || || ||||| || |||||||| || ||||| || || || || || || ||
Sbjct 110149 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 110208
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCA 42232
|| ||||| || || || || || || || |||| || | || | | | |
Sbjct 110209 GAGAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 110268
Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
||||| || |||||||| |||||||||||||||||
Sbjct 110269 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 110306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138906376600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |