Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 156 6e-33 seq10 104 3e-17 >seq5 Length=3972810 Score = 156 bits (172), Expect = 6e-33 Identities = 578/899 (64%), Gaps = 10/899 (1%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 ||||||||||| || | ||| | || ||||| ||| || || || | || | | Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || || | | | || || ||||| || ||||| || |||| || || || Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 ||||| | | ||| |||||| || || ||||| ||||| |||||| | | Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 | ||| || ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | |||||| || ||||| || | || | | ||| |||| || ||| ||||| Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGAC 72301 | ||| ||||| || || ||| ||| | | ||| || ||| || |||| Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT--CAGAC 1661510 Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 72361 | || || || ||| | || ||||| | ||||| || | || || ||||| || | Sbjct 1661511 CGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGT 1661570 Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 72421 | || || || ||| |||||| | || || || | | ||| | | ||| | Sbjct 1661571 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTAC 1661630 Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 72481 | || || || | || || || ||||| || || | || | ||||| | ||||| | Sbjct 1661631 CAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGG 1661690 Query 72482 TCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541 |||| || || || || || | || || || || || |||||||| | || | Sbjct 1661691 TCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGT 1661750 Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601 |||| || | ||| | | ||| || || ||||| |||||| |||||||| | Sbjct 1661751 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCT 1661810 Query 72602 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTT 72659 | ||||| || ||||||| ||||| || || ||||| | |||| |||| ||||||| Sbjct 1661811 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 1661868 Query 72660 ATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCC 72719 ||| || ||| ||| ||| || || |||| || || || | | | Sbjct 1661869 ATCGGCATGTTTCATAATTATTTCGTATGTCTCCTTTGATATCATTGGTGCAGGAGCATT 1661928 Query 72720 ATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttG 72778 ||||| || || ||||||| | | | ||| || || || | || | || || | Sbjct 1661929 GTTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGAC-CAACGAGAACTGCTTCTTGG 1661987 Query 72779 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 | | |||||| || || || ||||| || | ||| || ||||| || ||||| || ||| Sbjct 1661988 TCTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATAGCGTAATCAGGGTGT 1662046 >seq10 Length=610536 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || || ||||| ||| ||||||||||||||| | | || | |||||||| Sbjct 110089 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAG 110148 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || || ||||| || |||||||| || ||||| || || || || || || || Sbjct 110149 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 110208 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCA 42232 || ||||| || || || || || || || |||| || | || | | | | Sbjct 110209 GAGAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCC 110268 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 42270 ||||| || |||||||| ||||||||||||||||| Sbjct 110269 CTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 110306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138906376600