Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq10 141 1e-28 >seq10 Length=610536 Score = 141 bits (156), Expect = 1e-28 Identities = 297/435 (68%), Gaps = 21/435 (5%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || ||||| ||||| ||||| || ||||| || ||| || || ||||||| Sbjct 110246 CTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 110187 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || |||||||| || ||||| | |||||| | || ||||| Sbjct 110186 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 110127 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 || ||||| || ||| ||||| ||| || |||| || || || | | | ||| Sbjct 110126 GATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTCCCACCTGAACAACCGCCCC 110067 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 || | ||| | || ||| ||||| | | ||| ||||| | || || | Sbjct 110066 AG----CAAGCAG-GTTGTTGAGGACATCATCGT------CGAGGCCGTCGGCATTGAGC 110018 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATG 125723 | ||||| || || || | || || | || || | |||||||||| ||||| ||| Sbjct 110017 AGGAGTTCCTGACTGACGCTCTGCC-CTGTGCTCTGCTGGGCATGAACTCTAAGCTGATG 109959 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA-- 125781 ||| ||||||| ||||| || || || || |||| | | ||||| ||||| Sbjct 109958 TGCCAGTACATCGAGTTCGTCGCGGACCG---CCTGTTGGTGGCCCTTGGCAACAAGAAG 109902 Query 125782 -TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840 |||||||||| ||| ||||| || |||||| || || || | |||||||||| Sbjct 109901 TACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACC 109842 Query 125841 AACTTTTTCGAGAAG 125855 ||||| || |||||| Sbjct 109841 AACTTCTTTGAGAAG 109827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058875786600