Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=4068578 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/196 (72%), Gaps = 10/196 (5%) Strand=Plus/Minus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTC-GGGCACCACCCCGTCCTT 71477 ||||| | |||||||| |||||| ||||||||||| | ||| ||||| ||| || ||| Sbjct 1005482 GTCATACGGGAGGGAATGGCGTGAGGGTTGATGATCAAGTCAGGGCA-CACACCCTCCCG 1005424 Query 71478 GTCGAAGGGCATGTCCTCCTG--GGTCAG-GACAGCTCCGCATGTCCCCTTTTGCGCCGT 71534 ||| |||||||| ||||| ||| || || | ||| || |||||||| |||| Sbjct 1005423 AGTGAAAGGCATGTCTTCCTGACGGTAAGTGATA---CCGATGGTACCCTTTTG-TCCGT 1005368 Query 71535 GA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593 || || || |||||||| || |||| || | ||| ||||||| | |||||| | Sbjct 1005367 GACGAGAGGCGAACTTGTCTCCAATCTGGGGAATCTTGGTCGTCCTCATGCGCACCTTCA 1005308 Query 71594 CGAGCTTCTTGCCATC 71609 ||| |||| | |||| Sbjct 1005307 CGAACTTCAGGTCATC 1005292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764655495640