Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 187 4e-43
seq2 185 1e-42
>seq3
Length=4809046
Score = 187 bits (206), Expect = 4e-43
Identities = 191/247 (77%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||||
Sbjct 3193685 GCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 3193627
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| |||||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 3193626 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 3193567
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| |||||| || || |||| ||| || || ||| || ||
Sbjct 3193566 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCCGTCACCTACACTGA 3193507
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||||||| | || ||||||| || | || | || ||
Sbjct 3193506 GCACGCCAAGCGCAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTTAAGAGACAGGG 3193447
Query 16672 CCGTAAG 16678
|||||||
Sbjct 3193446 CCGTAAG 3193440
>seq2
Length=4967832
Score = 185 bits (204), Expect = 1e-42
Identities = 204/269 (76%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| || | ||||| | || || |||||||| || ||||| ||||| ||||
Sbjct 1332503 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 1332445
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| ||||| |||||||| ||||||||| |||| | || |||| |||||||
Sbjct 1332444 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 1332385
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | ||| ||||||| || |||| |||| |||||| || ||| || |
Sbjct 1332384 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGATGCCGTCACCTACACTG 1332325
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| || ||||| ||||||||| | || | ||||| || | || || || |
Sbjct 1332324 AGCACGCTAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGCCAGG 1332265
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | || ||||| || |||||
Sbjct 1332264 GCCGCACCCTGTACGGTTTCGGTGGTTAA 1332236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075167999255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |