Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 187 4e-43 seq2 185 1e-42 >seq3 Length=4809046 Score = 187 bits (206), Expect = 4e-43 Identities = 191/247 (77%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 3193685 GCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 3193627 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 3193626 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 3193567 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| |||||| || || |||| ||| || || ||| || || Sbjct 3193566 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCCGTCACCTACACTGA 3193507 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||||||| | || ||||||| || | || | || || Sbjct 3193506 GCACGCCAAGCGCAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTTAAGAGACAGGG 3193447 Query 16672 CCGTAAG 16678 ||||||| Sbjct 3193446 CCGTAAG 3193440 >seq2 Length=4967832 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 1332503 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 1332445 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||| |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 1332444 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 1332385 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | ||| ||||||| || |||| |||| |||||| || ||| || | Sbjct 1332384 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGATGCCGTCACCTACACTG 1332325 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| || ||||| ||||||||| | || | ||||| || | || || || | Sbjct 1332324 AGCACGCTAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGCCAGG 1332265 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || ||||| || ||||| Sbjct 1332264 GCCGCACCCTGTACGGTTTCGGTGGTTAA 1332236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075167999255