Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 5e-13 >seq10 Length=610536 Score = 89.7 bits (98), Expect = 5e-13 Identities = 230/349 (66%), Gaps = 15/349 (4%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || ||||| || || ||||| || || ||||| ||| | || || || | Sbjct 109809 CTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 109868 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||| | | | |||||| Sbjct 109869 CATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCCAAGGGCCACCAACAG 109928 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGC 119821 || || || || ||||||||||| | |||||| | || |||||||||| || ||| Sbjct 109929 GCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGCAGAGC 109988 Query 119822 GACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACATA 119879 || | ||| | || | ||| |||| |||||| |||| || || || | | | Sbjct 109989 ACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTC 110048 Query 119880 CTCAAC-ACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATAG 119938 |||||| |||| | ||| | | |||||| | |||| | | | || Sbjct 110049 CTCAACAACCTGCTTGCTGGGGCGGTTGTTCAGGT-GGGA-----------GAACAACAG 110096 Query 119939 ACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTG 119987 || || ||||||||||| || || || || | || ||||| |||||| Sbjct 110097 GCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTG 110145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662190585200