Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6 125 5e-24 seq5 91.5 1e-13 >seq6 Length=3949434 Score = 125 bits (138), Expect = 5e-24 Identities = 200/287 (70%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||||| ||| |||| || ||||| ||||||| ||||| |||||||| Sbjct 1383701 TTCTACCGTTACAAGATGGAGCGCCTCCAGTCCAAGATCGAGGGCAAGGGCAACGGTATC 1383642 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || ||||| |||||||| || |||||| || ||||| | |||||| | | ||| Sbjct 1383641 AAGACCGTTGTTGTCAACTTGAACTCGGTCGCTCAGTCGCTCAGTCGCCCTCCGTCTTAC 1383582 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || || | || || || |||||| | | | | || | || Sbjct 1383581 GTGATCAAGTACTTTGGCTTTGAGCTGGGTGCTCAGGCCAACGCCAAGCCCACTGATGAT 1383522 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| ||||||| | ||| | | ||||||| ||||||| || ||||||||| Sbjct 1383521 CGCTGGATCATTAACGGTGCCCATGATGCCCCCAAGCTTCAGGACTATCTGGACGGCTTT 1383462 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || |||||| |||||||| | ||||| | || ||||| || || Sbjct 1383461 ATCTCCAAGTTCGTGCTGTGCAAGAAATGCAAGAATCCGGAAACGGA 1383415 >seq5 Length=3972810 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||| | |||||| || |||||||||||||| || || ||||| || Sbjct 3010241 TTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 3010300 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | |||| | || || | || || || || || || || || || ||||| | | Sbjct 3010301 GAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGG 3010360 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||| || || || || || | ||| || || | | |||||| || || Sbjct 3010361 GGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCC 3010420 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||| ||||| || || || || | || |||||||| |||||||| Sbjct 3010421 ACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947057124085