Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 5e-24
seq5 91.5 1e-13
>seq6
Length=3949434
Score = 125 bits (138), Expect = 5e-24
Identities = 200/287 (70%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260
|||||||| ||||| ||| |||| || ||||| ||||||| ||||| ||||||||
Sbjct 1383701 TTCTACCGTTACAAGATGGAGCGCCTCCAGTCCAAGATCGAGGGCAAGGGCAACGGTATC 1383642
Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320
|| ||||| |||||||| || |||||| || ||||| | |||||| | | |||
Sbjct 1383641 AAGACCGTTGTTGTCAACTTGAACTCGGTCGCTCAGTCGCTCAGTCGCCCTCCGTCTTAC 1383582
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || || || || | || || || |||||| | | | | || | ||
Sbjct 1383581 GTGATCAAGTACTTTGGCTTTGAGCTGGGTGCTCAGGCCAACGCCAAGCCCACTGATGAT 1383522
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|||| ||| ||||||| | ||| | | ||||||| ||||||| || |||||||||
Sbjct 1383521 CGCTGGATCATTAACGGTGCCCATGATGCCCCCAAGCTTCAGGACTATCTGGACGGCTTT 1383462
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| |||||| |||||||| | ||||| | || ||||| || ||
Sbjct 1383461 ATCTCCAAGTTCGTGCTGTGCAAGAAATGCAAGAATCCGGAAACGGA 1383415
>seq5
Length=3972810
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
|| ||||| | | ||| | |||||| || |||||||||||||| || || ||||| ||
Sbjct 3010241 TTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 3010300
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
|| | |||| | || || | || || || || || || || || || ||||| | |
Sbjct 3010301 GAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGG 3010360
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|| | ||| || || || || || | ||| || || | | |||||| || ||
Sbjct 3010361 GGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCC 3010420
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| |||| ||||| || || || || | || |||||||| ||||||||
Sbjct 3010421 ACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947057124085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |