Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 87.8 2e-12
>seq5
Length=3972810
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| ||||||| || | ||||| | || |||||||| ||||||||||||||
Sbjct 3010914 GTCAAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCGAC 3010855
Query 25071 TCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTAT 25129
||||| | || | ||| ||||| || || || || || ||||| ||||| | ||
Sbjct 3010854 AATGTGAAGACCAAGATTCA-GGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCAT 3010796
Query 25130 TTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGA 25189
|| || || || || | || |||| || || || || ||||| || ||||| ||
Sbjct 3010795 CTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGA 3010736
Query 25190 ATCCACGCTACA 25201
|||||| || ||
Sbjct 3010735 ATCCACTCTTCA 3010724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327815158525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |