Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq10 96.9 4e-15
>seq10
Length=610536
Score = 96.9 bits (106), Expect = 4e-15
Identities = 340/519 (66%), Gaps = 14/519 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| |||||| || ||||| || || || || |||||||| || ||||| || |
Sbjct 109794 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGC 109853
Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|| || ||||| | || | || || || ||| ||||||| || ||||| | |
Sbjct 109854 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCC 109913
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
| | ||| | | || || || || || |||||||| |||||| | | | ||
Sbjct 109914 AAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTT 109973
Query 92968 CATTCCTAGAAGACGTACAGGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026
||| || || ||| | ||||| |||||||| |||| ||| || | ||| || | ||||
Sbjct 109974 CATGCCCAGCAGA-GCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGG 110032
Query 93027 CTTCTTTCAAGATTTCTATTACT--CTACTATTTGGTGGTTTTTGTACGACATAATTGTA 93084
| || | ||| || || || || ||| || |||| | | | | |
Sbjct 110033 CCTCGACGATGATGTCCTCAACAACCTGCTTGCTGG-GGCGGTTGTTC-AGGTGGGAGAA 110090
Query 93085 CATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAA 93144
|| | ||| || |||||||| || | ||| || || || || || | ||| ||| |||
Sbjct 110091 CAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAA 110150
Query 93145 TGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGa 93204
|| | ||| || | || || || ||||||||||| || || ||||| || ||| ||
Sbjct 110151 GGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGA 110210
Query 93205 aaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT 93264
|| || ||||| |||||||| || || || || | ||| | || || | || |
Sbjct 110211 GAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAA---GGTAGATTC 110267
Query 93265 ACTG--CT-GATCCATTTTAAAGCCCAATCGGCTTTTTT 93300
||| || |||||| || | ||||||||||| || ||
Sbjct 110268 CCTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 110306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860556373400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |