Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 4e-15 >seq10 Length=610536 Score = 96.9 bits (106), Expect = 4e-15 Identities = 340/519 (66%), Gaps = 14/519 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| || ||||| || || || || |||||||| || ||||| || | Sbjct 109794 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGC 109853 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907 || || ||||| | || | || || || ||| ||||||| || ||||| | | Sbjct 109854 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCC 109913 Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 | | ||| | | || || || || || |||||||| |||||| | | | || Sbjct 109914 AAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTT 109973 Query 92968 CATTCCTAGAAGACGTACAGGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGG 93026 ||| || || ||| | ||||| |||||||| |||| ||| || | ||| || | |||| Sbjct 109974 CATGCCCAGCAGA-GCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGG 110032 Query 93027 CTTCTTTCAAGATTTCTATTACT--CTACTATTTGGTGGTTTTTGTACGACATAATTGTA 93084 | || | ||| || || || || ||| || |||| | | | | | Sbjct 110033 CCTCGACGATGATGTCCTCAACAACCTGCTTGCTGG-GGCGGTTGTTC-AGGTGGGAGAA 110090 Query 93085 CATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAA 93144 || | ||| || |||||||| || | ||| || || || || || | ||| ||| ||| Sbjct 110091 CAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAA 110150 Query 93145 TGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGa 93204 || | ||| || | || || || ||||||||||| || || ||||| || ||| || Sbjct 110151 GGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGA 110210 Query 93205 aaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT 93264 || || ||||| |||||||| || || || || | ||| | || || | || | Sbjct 110211 GAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAA---GGTAGATTC 110267 Query 93265 ACTG--CT-GATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 ||| || |||||| || | ||||||||||| || || Sbjct 110268 CCTGTCCTGGATCCACTTGATGGCCCAATCGGCCTTCTT 110306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860556373400