Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 5e-19
seq2 86.0 5e-12
>seq5
Length=3972810
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || || || ||| |||| | ||||| ||| | ||
Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || |||||||||||||| || ||||| || || ||
Sbjct 3010638 GACACCATCGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCAG 3010579
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || ||||| || || ||| | |||||| ||| ||| | ||||| ||||||
Sbjct 3010578 CAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAAC 3010519
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| || ||||| |||
Sbjct 3010518 ATTCAGAAGGAATCGACC 3010501
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| ||||| | | || || | ||| || | ||
Sbjct 3010902 ACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCGACAATGTGAAGACC 3010843
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| || || ||||| || || ||||| || || || || ||
Sbjct 3010842 AAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCGGGAAAG 3010783
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| ||| ||| | || || |||||||| ||||| ||||||||
Sbjct 3010782 CAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAATCCAC 3010730
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || || || | | ||||||| | ||| | | ||
Sbjct 3011204 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAACGTTAAGACC 3011145
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || ||||| || || ||||| || || || || ||
Sbjct 3011144 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTGGAAAG 3011085
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| ||| ||| | || || |||||||| || || || || || | ||
Sbjct 3011084 CAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTCTACTCTCCAC 3011025
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
| ||| | || |||| || |||
Sbjct 3011024 CTCGTTCTCCGCCTGCGTGGTGGT 3011001
>seq2
Length=4967832
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 3523910 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 3523969
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || |||||||||||||| || || ||||| || |||||
Sbjct 3523970 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCT 3524029
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| || || || || ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 3524030 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 3524089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727820959775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |