Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq10 156 9e-33
seq1 127 4e-24
>seq10
Length=610536
Score = 156 bits (172), Expect = 9e-33
Identities = 278/402 (69%), Gaps = 8/402 (2%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| ||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 109831 TCAAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTCGTG 109890
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | ||| | |||||| || || || | |||||| || || ||||| |
Sbjct 109891 GCGTTGTAGTACTTCTTGTTGCCAAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATG 109950
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | |||||||||||| | || | ||| || | || ||| | |
Sbjct 109951 TACTGGCACATCAGCTTAGAGTTCATGCCCAGCAGAGCACAGGGCAGAGCGTCAGTCAGG 110010
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798
|| |||| || || | || ||||| | | || ||| ||||| | | | |
Sbjct 110011 AACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCCTCAACAACCTGCTTGCTGGGG 110070
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
| | ||||| ||| | ||| ||| || | | || | |||||||||||| ||
Sbjct 110071 C-GGTTGTT---CAGGTGGGAGAACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATC 110126
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
||| ||||| ||||||||| | ||| |||||||| | ||||| ||| |||||||
Sbjct 110127 ACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCA 110186
Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960
|||||| | ||||| || ||||| | | |||||| ||
Sbjct 110187 GAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCCAC 110228
>seq1
Length=6182763
Score = 127 bits (140), Expect = 4e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||||||||| |||| |||||| || || || |||| ||||||||||| |||
Sbjct 541341 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAAC 541400
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
||| ||||| | |||||||||| | || || ||||| |||| ||||| || |
Sbjct 541401 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 541460
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
||||||| |||||| ||||| ||||| |||| ||||| || || || || ||
Sbjct 541461 GGTAAGACCACTCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAG 541520
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
|||||| | ||| || || || |||||||||
Sbjct 541521 GATGAGGTCAAGACCGTCTACGTTGAGCACGAC 541553
Score = 86.0 bits (94), Expect = 1e-11
Identities = 100/133 (75%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759
|| || || ||||| ||||||||||||||||| || | || ||| ||| | | |
Sbjct 541701 TCCCTCTCTGGTGGATGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTGTTCGAGTCC--C 541758
Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819
||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| ||||||
Sbjct 541759 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 541818
Query 279820 TAGTGTCCTACCT 279832
| | | ||||||
Sbjct 541819 TGGAGAACTACCT 541831
Score = 86.0 bits (94), Expect = 1e-11
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| |||||||| || || || ||| ||||| | ||| | | || ||
Sbjct 542745 CACTCCCGCATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGC 542804
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
||| ||||| | ||||| || |||||||| ||||||||||| ||||| |||||||| ||
Sbjct 542805 TCT-TGGCAGCGTCCTCATGTCATCGTTCTGGACGAGCCTACTAACTACCTGGACCGTGA 542863
Query 280823 GAGCCTGGGCGCTCTG 280838
|| || ||||||
Sbjct 542864 TTCTCTCGGTGCTCTG 542879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836339079435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |