Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5 161 2e-34 seq10 159 6e-34 seq2 120 6e-22 seq1 113 8e-20 seq6 93.3 8e-14 >seq5 Length=3972810 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || || || || || ||||| || ||||| Sbjct 3010472 CCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAC 3010531 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| || || || || | | || ||||| || ||| Sbjct 3010532 AAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 3010591 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||||||||| | ||| ||| ||||||||||| | ||||| ||| Sbjct 3010592 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACT 3010651 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || |||||||| || ||||||||||| |||||||| Sbjct 3010652 TCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 149 bits (164), Expect = 1e-30 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || ||||| || ||||||||||| || || || Sbjct 3010700 CCACCACGAAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 3010759 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | || |||||||| || Sbjct 3010760 AGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 3010819 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | ||| || ||||| ||||| | || || || Sbjct 3010820 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACC 3010879 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | |||||| || ||||| || ||||||||||||| || Sbjct 3010880 TCAAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGACTA 3010919 >seq10 Length=610536 Score = 159 bits (176), Expect = 6e-34 Identities = 319/470 (68%), Gaps = 6/470 (1%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || ||||| ||| |||||||||| ||| ||| | Sbjct 109794 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGC 109853 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || || |||||||||||| ||||||||| |||| | | ||| || || Sbjct 109854 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCC 109913 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || || | |||||| || ||||||||||||||||||| |||||| | ||||| Sbjct 109914 AAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTT 109973 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || ||||| | ||||| | ||| |||| || || |||| || Sbjct 109974 CATGCCCAGCAGAGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGC 110033 Query 10175 TTCCTCGACGATGCTCTTTACCACGT-CAAG--GGACAGCTTGTTCTCGAGCTTCGAATA 10231 || ||| |||| || || || | | | || | |||||| || | || | Sbjct 110034 CTCGACGATGATGTCCTCAACAACCTGCTTGCTGGGGCGGTTGTTC---AGGTGGGAGAA 110090 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 || || | || | ||| || ||||| || || ||||| ||||||||| || Sbjct 110091 CAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAA 110150 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 |||||| |||||||| || || || |||||||| |||| ||| || ||||| Sbjct 110151 GGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGA 110210 Query 10352 GAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 ||| | || |||||||||| | | || ||||| |||| ||||||| Sbjct 110211 GAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 110260 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || ||||||||| | | || ||||| |||| | ||| ||||||| Sbjct 110539 AGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGGAGATGAAG 110598 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | |||||| || |||||||| | ||||||| || ||||| | || | | Sbjct 110599 TAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGAAAGATCAATT 110658 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||||| ||| ||||||||||||||||||| Sbjct 110659 TCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTG 110702 >seq2 Length=4967832 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| || ||||| || Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || || || || || || || |||||||| || ||||| | ||||||| ||| Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3523970 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || |||||||||||||||||||| Sbjct 3523969 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 3523911 >seq1 Length=6182763 Score = 113 bits (124), Expect = 8e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 || || | |||||| || ||||| || ||| || || | | |||||||||||| Sbjct 541561 GCATCCAAGTCGTGCTCAACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCA 541502 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 ||||| | || || ||||| | || || |||| || | |||||||| |||| Sbjct 541501 AGCTGCTCGTTGTTGATGGCACGCATGAGAGTGGTCTTACCGGTACCGTTGGGGCCGAGC 541442 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || |||||| | | || ||||||| | ||||| || |||||| || |||||| || Sbjct 541441 AGACCGTAACGCTGACCACGCTTGAGGCGGAGGCTGGTCTGGTTCAGCAGAATCTTGGCA 541382 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 || || || |||||||| ||| | |||||| |||||||||||||| Sbjct 541381 CCGTAAGCCAGGGAGAAAGTGCAGTTGCACAGATCCTCACCCTCCTC 541335 >seq6 Length=3949434 Score = 93.3 bits (102), Expect = 8e-14 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 225432 CCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGA---TGGACGACACGT 225488 ||| ||| ||| |||| |||||||| |||||||| || || || | ||| || | | Sbjct 2572171 CCGTGCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAGACGATCAAACTGGT-GATA--T 2572227 Query 225489 TCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTG 225548 || | ||| |||| | |||||| |||||| || |||| |||||| | Sbjct 2572228 CGGTGTGCTTCTTCAGGTACTCCTGGAGCCACTTGACGTTGGCCACATCCAAGTGGTTAG 2572287 Query 225549 TAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCT 225608 ||||||||||||| || |||| ||| || | || ||||| |||| |||| |||| Sbjct 2572288 TAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCACGCGCCAGAGCGAGCT 2572347 Query 225609 TCATTTTCCAGCCCCCGGACAGGGAGCC 225636 |||| ||||| || || ||||||||||| Sbjct 2572348 TCATCTTCCAACCTCCAGACAGGGAGCC 2572375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621996790200