Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 6e-24
>seq5
Length=3972810
Score = 125 bits (138), Expect = 6e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || ||||| || ||||||||||| |||
Sbjct 3010469 ATACCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCG 3010528
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||| ||| || || || |||||||| |||| | |||||| ||||||||
Sbjct 3010529 GACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGG 3010588
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||||||||| ||||| |||| || || ||| | | || | |||||||| |||||
Sbjct 3010589 GGAATGCCTTCCTTGTCTTGAATC-TTGGTCTTAACGTTATCGATGGTGTCGGAAGATTC 3010647
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||| || || || ||||| || || || ||||||||
Sbjct 3010648 AACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||| | ||||| |||||| || || ||||||||| |
Sbjct 3010280 TCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAA 3010339
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
||||||||||| || ||||| |||||||| || || || ||||| | || | |
Sbjct 3010340 ATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTA 3010399
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|||| || || | | || || || | || | ||| |||||||| || || || ||
Sbjct 3010400 TCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACG 3010459
Query 114372 AAAATCTGCAT 114382
|| ||||||||
Sbjct 3010460 AAGATCTGCAT 3010470
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || ||||| ||||| |||||||| ||
Sbjct 3010697 ATACCACCACGAAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCA 3010756
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||| ||| || || || || || ||| ||||||||||||| ||||| |||
Sbjct 3010757 GACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGA 3010816
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| |||||| || | | || | ||||| | || ||
Sbjct 3010817 GGGATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCC 3010876
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | ||| | || || |||||||| || || ||
Sbjct 3010877 ACCTCAAGGGTGATAGTCTTTCCGGTCAGGGTCTTGAC 3010914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134220786420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |