Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 237 3e-57 seq5 172 1e-37 >seq10 Length=610536 Score = 237 bits (262), Expect = 3e-57 Identities = 371/519 (71%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| || ||||| |||| |||||| || || | || Sbjct 110318 CCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACC 110259 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| || | || || || || | ||||| ||||| || |||||||| || ||||| Sbjct 110258 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTC 110199 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||||||| || ||| || ||||| || || |||||||| ||||| Sbjct 110198 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTGACCTTCTCCAACGA 110140 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | || ||||| ||||| | ||||| |||||||| ||||||| ||| Sbjct 110139 GCTCATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCTC---CCA 110083 Query 42872 CCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||| | |||| |||| | ||| || || || ||||||| |||||||| | Sbjct 110082 CCT---GAACAACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGCCGTCGG 110026 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACG 42987 || ||| |||||||||| || | | |||||| ||| | ||| | ||||||||| Sbjct 110025 CATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTG-CTCTGCTGGGCATGAACTCTA 109967 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTC 43046 | || |||||| |||||||| ||| |||||| |||| || | ||| | ||| Sbjct 109966 AGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGGCAACA 109907 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||||| | || |||||||||||| |||||| |||||| ||| ||| Sbjct 109906 AGAAG-TACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGT 109848 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| || |||||||| || | ||||||||| Sbjct 109847 AAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTACCAG 109809 >seq5 Length=3972810 Score = 172 bits (190), Expect = 1e-37 Identities = 361/530 (68%), Gaps = 10/530 (2%) Strand=Plus/Plus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCA-CGACGCCGGG 244972 ||| || || ||||||||| || |||| || | | ||| ||||| || | ||| Sbjct 1661143 GTAGAGAGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTG--GGG 1661200 Query 244973 CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAG 245032 || | || |||| || ||| ||| || | || |||||| || || ||| |||| Sbjct 1661201 CAGAACAGGGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCAC 1661260 Query 245033 AGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCT 245090 ||||| | ||| || || | | ||||| ||| ||| || |||||| | || | Sbjct 1661261 AGGGCGTAGAACAGATCACGAG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGAT 1661318 Query 245091 CCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCC 245150 ||| || |||||||| || |||||||||||| | ||||| |||| || ||||| | Sbjct 1661319 CCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGAC 1661378 Query 245151 GCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGC 245209 |||||||||| |||||||| || || | || | |||||||| || || |||| Sbjct 1661379 GCTTGTTGCCACCCTGGTCAACGTATCTGGC-AGTGTTGTTGAAGACACGAAGCATAGGA 1661437 Query 245210 ACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTG 245269 || | ||||| ||| |||||||| || ||||||| ||| | | || | | Sbjct 1661438 ACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGG 1661497 Query 245270 CTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTG 245329 | | || || | || ||||| ||||||||| | |||||| |||| | ||| Sbjct 1661498 TGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTG 1661557 Query 245330 TCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGG 245389 || || || || ||||||||| |||||||| || || ||||| |||| |||||| Sbjct 1661558 TCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGG 1661617 Query 245390 GGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||| ||| | | | |||||||||||| ||| |||||| || ||||| Sbjct 1661618 GGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTA 1661667 Score = 161 bits (178), Expect = 2e-34 Identities = 703/1105 (64%), Gaps = 39/1105 (4%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| || ||||||| | || | ||||||||||||||| ||||| | | Sbjct 1659953 TGAACTGGATGGGCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATGCCCGTCTTCAAAC 1660012 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | | |||| || | ||||||| || | ||| ||| || ||| Sbjct 1660013 CCATCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCT--------- 1660063 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 ||| ||| || |||||||||||| |||||| | ||| | | || || || | Sbjct 1660064 CCTT---CAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCCGCAG 1660120 Query 243921 CCATGGTGATGA--GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 |||| || || |||| ||| || ||||| || |||||||||| | | ||||| Sbjct 1660121 CCAT-CTGCAGAATCGTCC-GCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGAT 1660178 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 || ||||| ||||||||| || || || | | | |||| || | Sbjct 1660179 GTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTTCTT 1660238 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCAC 244098 |||||| || ||||||||| | | |||| ||| | ||| ||| ||||| Sbjct 1660239 CATGTTGTCCGACCACAGGCCGAGGTCAACCAGGTCCTTCAGCAGCCAGGGGTTGACCAC 1660298 Query 244099 CTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCT 244158 ||| ||||| || | || || ||||| ||||| |||| | || ||||||| || Sbjct 1660299 CTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAGCA 1660358 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| || ||||| ||||| || || ||||| |||||||| | ||||||| || Sbjct 1660359 CTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGAGCGACCAGCAAGCT 1660418 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAG-CTCGTTCCAGTCCCACATGCCCG 244277 ||| | || || ||||| ||| ||| || || | ||||||| | || Sbjct 1660419 GTTGCGGACACC---AGTCTGG--GCG--ATCTTAGCCTTGAGAGAGTCCCA---GTCCC 1660468 Query 244278 AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGC 244337 ||||||| | | || || |||||||||| |||| || | |||| | ||| || Sbjct 1660469 AGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAGGAG 1660528 Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGG 244397 ||||| |||||| ||| | ||| || ||| || | | || | Sbjct 1660529 ATCCCTCATAGGTCTCGTAAGTGCCGAACTCCTTGGCAAGATCGGACGAGGCGGTCAAAC 1660588 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGA 244457 | |||| |||||| |||||||||||| |||||| | | ||||| | | || || Sbjct 1660589 CAGCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGTCTGGCCTCGGCCGAGTCGA 1660648 Query 244458 AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTC 244517 |||| | || || | ||| | || ||||| || | || || | | ||||| | Sbjct 1660649 AGGGCAGGCGCAGAGCGAGGAAAGCATCAGCCAGACCGTTGACACCCAGAGCAATGGGAC 1660708 Query 244518 TGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCT 244577 ||| || |||||| | |||| || || |||||||| ||||| |||||| | || Sbjct 1660709 GGTGACGGAAGTTGGACTTCTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATGATCT 1660768 Query 244578 TGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGT 244637 |||| ||||| ||| | | |||| || ||| ||| |||||| |||||| Sbjct 1660769 TGTTCAGGTTACGGACCAAGACCTGGACAACCTCGTGGAGCTTGCCAAAGTCATACTCGC 1660828 Query 244638 AGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGC 244697 | || | || ||| | ||| | | || || | | || ||||| | Sbjct 1660829 CGCGAGCAGCGTCGACG-----------AAAGTAG-GCAGAGCAAGGGACGCAAGGTTAC 1660876 Query 244698 AGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACT 244757 |||| || ||||| |||| |||||| | ||||| ||||||||||| || Sbjct 1660877 AGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTAC 1660936 Query 244758 TGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGA 244817 |||||| || |||| || || ||| ||| |||||| || |||||||| ||||||| Sbjct 1660937 GGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGA 1660996 Query 244818 AGGGCCCCCCGGTCTCGAGCTGGGC 244842 |||| || ||||| |||||| Sbjct 1660997 AGGGGTTACCAGTCTCAGTCTGGGC 1661021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338786851600