Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 1e-18
seq2 107 5e-18
>seq5
Length=3972810
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || |||| || ||| || || || || |||||||
Sbjct 3010472 CCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAC 3010531
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | || || || || ||||||| |||||| || || |||
Sbjct 3010532 AAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGG---TCCGGG 3010588
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| ||||| || || || || || | || ||||| || || | ||| |||||
Sbjct 3010589 GGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCA 3010648
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | ||||||||||| || || |||||||||||||| ||||||||
Sbjct 3010649 ACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698
Score = 105 bits (116), Expect = 2e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | || || || ||||| || ||||| |
Sbjct 3011002 CCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3011061
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || ||||| ||||||||||||||||| || |||
Sbjct 3011062 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGG 3011121
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || ||||| || || | ||||||||| || ||
Sbjct 3011122 ATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACC 3011181
Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449
||||| ||||| ||||| |||||
Sbjct 3011182 TCGAGGGTGATGGTCTTGCCGGT 3011204
>seq2
Length=4967832
Score = 107 bits (118), Expect = 5e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || || || ||||||||
Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|||||||| ||| ||||| || || || |||||||| || | || ||||| ||
Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3523970
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || || || |||||||||||
Sbjct 3523969 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 3523911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653870998730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |