Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq10 105 1e-17
seq6 95.1 3e-14
seq1 86.0 1e-11
>seq10
Length=610536
Score = 105 bits (116), Expect = 1e-17
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
|||||||||||| | || ||| | ||||||||||| ||||| || |||||| | || |
Sbjct 109979 GGCATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTG 109920
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
|| ||||| | |||| |||||| ||| ||||||||| | ||| |||||| ||
Sbjct 109919 GCCCTTGGCAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATC 109860
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGT 243747
||||| || || || |||||||| || ||||| || |||| || || |||||
Sbjct 109859 TCGCTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGT 109800
Query 243748 GTGATG 243753
|| |||
Sbjct 109799 GTCATG 109794
>seq6
Length=3949434
Score = 95.1 bits (104), Expect = 3e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 333775 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 333834
||||||| ||| ||| ||||| || |||||||||| ||||||||||| || || |
Sbjct 2572153 GTTCGTAGTGGTAGATATCCGTGCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAGACGA 2572212
Query 333835 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACA 333894
||| | | | || | | || ||||||| || |||||| | ||||| | ||
Sbjct 2572213 TCAAACTGGTGATATCGGTGTGCTTCTTCAGGTACTCCTGGAGCCACTTGACGTTGGCCA 2572272
Query 333895 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCAC 333954
|| | ||||| || || ||||| || || || | | || || | ||||| ||||
Sbjct 2572273 CATCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCAC 2572332
Query 333955 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991
| || |||||||| ||||| ||||| ||||| || ||
Sbjct 2572333 GCGCCAGAGCGAGCTTCATCTTCCAACCTCCAGACAG 2572369
>seq1
Length=6182763
Score = 86.0 bits (94), Expect = 1e-11
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202
||||| || ||||| | || || | ||||| |||||| || |||||||| ||
Sbjct 541552 TCGTGCTCAACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCAAGCTGCTCG 541493
Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262
|| || || ||||| ||||| | ||||| | ||||| || || |||||||||
Sbjct 541492 TTGTTGATGGCACGCATGAGAGTGGTCTTACCGGTACCGTTGGGGCCGAGCAGACCGTAA 541433
Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322
|| | |||||||| || || | || | |||||| ||||| || |||| || |||
Sbjct 541432 CGCTGACCACGCTTGAGGCGGAGGCTGGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCC 541373
Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354
|| || || || | ||||||||||||||
Sbjct 541372 AGGGAGAAAGTGCAGTTGCACAGATCCTCACC 541341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879505427250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |