Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq10 105 1e-17 seq6 95.1 3e-14 seq1 86.0 1e-11 >seq10 Length=610536 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 |||||||||||| | || ||| | ||||||||||| ||||| || |||||| | || | Sbjct 109979 GGCATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTG 109920 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || ||||| | |||| |||||| ||| ||||||||| | ||| |||||| || Sbjct 109919 GCCCTTGGCAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATC 109860 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGT 243747 ||||| || || || |||||||| || ||||| || |||| || || ||||| Sbjct 109859 TCGCTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGT 109800 Query 243748 GTGATG 243753 || ||| Sbjct 109799 GTCATG 109794 >seq6 Length=3949434 Score = 95.1 bits (104), Expect = 3e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 333775 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 333834 ||||||| ||| ||| ||||| || |||||||||| ||||||||||| || || | Sbjct 2572153 GTTCGTAGTGGTAGATATCCGTGCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAGACGA 2572212 Query 333835 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACA 333894 ||| | | | || | | || ||||||| || |||||| | ||||| | || Sbjct 2572213 TCAAACTGGTGATATCGGTGTGCTTCTTCAGGTACTCCTGGAGCCACTTGACGTTGGCCA 2572272 Query 333895 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCAC 333954 || | ||||| || || ||||| || || || | | || || | ||||| |||| Sbjct 2572273 CATCCAAGTGGTTAGTAGGTTCGTCCAGCAGGAGGACGTCCGCCTTGCGCAGCATGGCAC 2572332 Query 333955 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 | || |||||||| ||||| ||||| ||||| || || Sbjct 2572333 GCGCCAGAGCGAGCTTCATCTTCCAACCTCCAGACAG 2572369 >seq1 Length=6182763 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| | || || | ||||| |||||| || |||||||| || Sbjct 541552 TCGTGCTCAACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAGCCCTCAAGCTGCTCG 541493 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || || || ||||| ||||| | ||||| | ||||| || || ||||||||| Sbjct 541492 TTGTTGATGGCACGCATGAGAGTGGTCTTACCGGTACCGTTGGGGCCGAGCAGACCGTAA 541433 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | |||||||| || || | || | |||||| ||||| || |||| || ||| Sbjct 541432 CGCTGACCACGCTTGAGGCGGAGGCTGGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCC 541373 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | |||||||||||||| Sbjct 541372 AGGGAGAAAGTGCAGTTGCACAGATCCTCACC 541341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879505427250