Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq5 185 9e-42
>seq5
Length=3972810
Score = 185 bits (204), Expect = 9e-42
Identities = 431/646 (67%), Gaps = 8/646 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | | ||| | ||||| ||| ||||| ||| ||||| | ||| | ||
Sbjct 1661832 AACTACAACTTCTTCGGTTTCAAGACTTTGGAGCGGTCCTACCTGTTGCGGATCAACGGA 1661773
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| | ||||| || || || ||||||||||| || ||| | || || |||||| |
Sbjct 1661772 AAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCCGTTGGTATCCACGGCAGC 1661713
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891
||||| ||| | | | | | || || || | ||| ||| ||
Sbjct 1661712 GACATTGAGAAGGCCATCGAGACCTACA---ACTTGATGTCTCAGAAGTACTTCACTCAC 1661656
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| ||||||| ||||||||||| || || || ||| ||| | | || || |||||
Sbjct 1661655 GCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCCCAGCTCGCCTCTTGCTTCCTC 1661596
Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010
| ||| | |||| ||| ||| ||| || | ||||| || ||| ||| || |
Sbjct 1661595 GTCGAC-ATGAAGGAGGACAGCATTGACGGTATCTACGACACTCTGAAGACCTGCGCTAT 1661537
Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070
||||| || || || || ||||| | | || ||| | | ||| | | || ||
Sbjct 1661536 GATCTCCAAGACGGCCGGTGGTATCGGTCTGAACGTGCACCGCATCCGTTCTACTGGCTC 1661477
Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130
|||||| | |||||||| || ||||||||||| || || |||||||| || ||||||||
Sbjct 1661476 CTACATTGGTGGTACCAACGGTACCTCCAACGGTCTTGTTCCTATGCTTCGTGTCTTCAA 1661417
Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190
|||| | || | ||||| ||||||||||| | | | ||| | ||||| ||||
Sbjct 1661416 CAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCATTCGCCATCTA 1661357
Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250
|| |||||||||||| |||| || | ||| | || || || ||||||||||| ||
Sbjct 1661356 CCTTGAGCCCTGGCACTCGGATGTCTTTGAGTTCCTGGATCTCCGTAAGAACCACGGTAA 1661297
Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
|| || || || | || || |||||||| || ||| || || || || |||||
Sbjct 1661296 GGAGGAGGTCAGAGCTCGTGATCTGTTCTACGCCCTGTGGACCCCGGATCTGTTCATGAA 1661237
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356
|| || ||| ||| | ||||| || || || ||||| |||
Sbjct 1661236 GCGTGTTGAGGCGAACGGTGACTGGACCCTGTTCTGCCCCAACGAA 1661191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722983558600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |