Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq10 125 7e-24 seq5 105 7e-18 seq2 93.3 4e-14 seq1 82.4 8e-11 >seq10 Length=610536 Score = 125 bits (138), Expect = 7e-24 Identities = 344/520 (66%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| || ||||||||| || |||| | Sbjct 110321 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAG---GACAGGGAA 110265 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || |||| | || || ||||| || ||||| | || || ||||| Sbjct 110264 TCTACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || ||||||| | | || | | || | ||||| || ||||| ||| | Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562 |||||| | || || || || || || |||||||| ||||| || ||||| | | | Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCT-- 110087 Query 52563 ACGCGCGTGACCGAAAAATTGGATTCGGA--CACGATCCTGAG--CATGTTCAAGGAGGC 52618 | | | ||| | || | | | || | | |||| ||| || ||||| Sbjct 110086 -CCCACCTGAAC----AACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGC 110032 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || | || || ||||||| | || | ||| ||||| | |||||||||||||| Sbjct 110031 CGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAA 109972 Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 | | || |||||| ||||||||||||| || ||||| || ||||||||| || || Sbjct 109971 CTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGG 109912 Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 || | | ||||||| |||||| || || || || || ||| | || ||||| | Sbjct 109911 -CAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGG 109853 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| ||||||||||| || |||||||| || || || || Sbjct 109852 CGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTA 109813 >seq5 Length=3972810 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||| || ||||| ||||| || || ||||| | | Sbjct 3010505 GATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCA 3010564 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | |||||| |||||||| || || ||||| ||||| ||| | || || |||| Sbjct 3010565 AAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 3010623 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||||| || || || || | || | ||| || || || ||||| || Sbjct 3010624 GTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTT 3010683 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 3010684 GACGAAGATCTGCAT 3010698 Score = 82.4 bits (90), Expect = 8e-11 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||||| ||||| || || || || | Sbjct 3011035 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCG 3011094 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| ||||| || || || ||||| || | || || |||| Sbjct 3011095 AAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC-CTGGATCTTGGTCTTAAC 3011153 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGA 138571 ||| || | ||| ||| ||||||| ||||||| Sbjct 3011154 GTTG-TCGATGGTATCGCTCGACTCGACCTCGA 3011185 >seq2 Length=4967832 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 3524091 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3524032 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| || ||||| || ||||| || ||||| || | || || || | ||| Sbjct 3524031 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 3523973 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| || || || || || Sbjct 3523972 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 3523914 Query 138603 AAAA 138606 ||| Sbjct 3523913 GAAA 3523910 >seq1 Length=6182763 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || || |||||| | ||| || ||||| ||| || | | | |||||| ||||| Sbjct 808723 GGTCTTGAAGTTGCCAAGGTCACCAACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGT 808782 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 ||||| |||||| ||||| || || || |||||||||||| || |||| ||||| Sbjct 808783 CTTGCCGAAGGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 808842 Query 57420 CTCGTGAACGTGAAATCC 57437 || ||| ||||| || || Sbjct 808843 CTGGTGGACGTGGAAGCC 808860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262182885200