Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq10 125 7e-24
seq5 105 7e-18
seq2 93.3 4e-14
seq1 82.4 8e-11
>seq10
Length=610536
Score = 125 bits (138), Expect = 7e-24
Identities = 344/520 (66%), Gaps = 19/520 (4%)
Strand=Plus/Minus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383
|| || ||| || ||| ||||| | ||||| || ||||||||| || |||| |
Sbjct 110321 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAG---GACAGGGAA 110265
Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
| || | || |||| | || || ||||| || ||||| | || || |||||
Sbjct 110264 TCTACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
||| || ||||||| | | || | | || | ||||| || ||||| ||| |
Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG 52562
|||||| | || || || || || || |||||||| ||||| || ||||| | | |
Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGCCTGTTGTTCT-- 110087
Query 52563 ACGCGCGTGACCGAAAAATTGGATTCGGA--CACGATCCTGAG--CATGTTCAAGGAGGC 52618
| | | ||| | || | | | || | | |||| ||| || |||||
Sbjct 110086 -CCCACCTGAAC----AACCGCCCCAGCAAGCAGGTTGTTGAGGACATCATCGTCGAGGC 110032
Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678
|| | || || ||||||| | || | ||| ||||| | ||||||||||||||
Sbjct 110031 CGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAA 109972
Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738
| | || |||||| ||||||||||||| || ||||| || ||||||||| || ||
Sbjct 109971 CTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGG 109912
Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797
|| | | ||||||| |||||| || || || || || ||| | || ||||| |
Sbjct 109911 -CAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGG 109853
Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| ||||||||||| || |||||||| || || || ||
Sbjct 109852 CGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTA 109813
>seq5
Length=3972810
Score = 105 bits (116), Expect = 7e-18
Identities = 142/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| ||||||||||||||| || ||||| ||||| || || ||||| | |
Sbjct 3010505 GATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCA 3010564
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| | |||||| |||||||| || || ||||| ||||| ||| | || || ||||
Sbjct 3010565 AAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 3010623
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| || | |||||||| || || || || | || | ||| || || || ||||| ||
Sbjct 3010624 GTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTT 3010683
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 3010684 GACGAAGATCTGCAT 3010698
Score = 82.4 bits (90), Expect = 8e-11
Identities = 112/153 (73%), Gaps = 4/153 (3%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || ||||| ||||| || || || || |
Sbjct 3011035 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCG 3011094
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| |||||||| ||||| ||||| || || || ||||| || | || || ||||
Sbjct 3011095 AAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC-CTGGATCTTGGTCTTAAC 3011153
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGA 138571
||| || | ||| ||| ||||||| |||||||
Sbjct 3011154 GTTG-TCGATGGTATCGCTCGACTCGACCTCGA 3011185
>seq2
Length=4967832
Score = 93.3 bits (102), Expect = 4e-14
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || ||||| || || ||||| | |||
Sbjct 3524091 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3524032
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| |||||||| || ||||| || ||||| || ||||| || | || || || | |||
Sbjct 3524031 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 3523973
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| || || || || ||
Sbjct 3523972 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 3523914
Query 138603 AAAA 138606
|||
Sbjct 3523913 GAAA 3523910
>seq1
Length=6182763
Score = 82.4 bits (90), Expect = 8e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359
|| || || |||||| | ||| || ||||| ||| || | | | |||||| |||||
Sbjct 808723 GGTCTTGAAGTTGCCAAGGTCACCAACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGT 808782
Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419
||||| |||||| ||||| || || || |||||||||||| || |||| |||||
Sbjct 808783 CTTGCCGAAGGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 808842
Query 57420 CTCGTGAACGTGAAATCC 57437
|| ||| ||||| || ||
Sbjct 808843 CTGGTGGACGTGGAAGCC 808860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262182885200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |