Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 5e-19
seq2 98.7 9e-16
>seq5
Length=3972810
Score = 109 bits (120), Expect = 5e-19
Identities = 130/174 (75%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || || || ||||| || || || || ||| || ||||| ||||||
Sbjct 3011032 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCA 3011091
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| |||||||| |||||||| ||||||||||||||| ||| || |||
Sbjct 3011092 GCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTA 3011151
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| |||| ||| || | |||||| |||| ||| | || ||||||||
Sbjct 3011152 ACGTTG-TCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 3011204
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | |||||| || | || ||| || || || ||||| |||
Sbjct 3010243 TCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 3010302
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||| || ||| || ||||| || |||||| | || | ||||||||||| || ||
Sbjct 3010303 GAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGG 3010362
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||| || ||| || | ||||| | || | || |||| ||||| ||
Sbjct 3010363 AATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCAC 3010422
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| |||||||| || || || || || ||||||||
Sbjct 3010423 CTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470
Score = 86.0 bits (94), Expect = 6e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || ||||| || ||||| || || || || ||| || ||||| |||||
Sbjct 3010730 GTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCC 3010789
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| |||||||| ||||||||||||||| || || |||
Sbjct 3010790 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTC 3010849
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | | ||| || || | ||| | || || |||||||| ||
Sbjct 3010850 ACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAGGGTC 3010909
Query 127097 TTTAC 127101
|| ||
Sbjct 3010910 TTGAC 3010914
>seq2
Length=4967832
Score = 98.7 bits (108), Expect = 9e-16
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| || |||||| ||||
Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| ||||||||||| || || || |||||||||||| ||| || ||||| |||| ||
Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 3523971
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || || || || || || ||
Sbjct 3523970 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 3523911
Query 127105 A 127105
|
Sbjct 3523910 A 3523910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500591968400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |