Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq5 104 2e-17 >seq5 Length=3972810 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || |||||||| || || || || ||| Sbjct 3010469 ATACCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCG 3010528 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || || || || | ||||| || ||||||||||| Sbjct 3010529 GACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGG 3010588 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || ||||||| | || || | | || | || | |||||||||||| || Sbjct 3010589 GGAATGCCTTCCTTGTCTTGAA-TCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTC 3010647 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | ||| || || || ||||| || || || || ||||| Sbjct 3010648 AACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 82.4 bits (90), Expect = 7e-11 Identities = 189/285 (66%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 122889 ATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948 ||| | | |||||| || || ||| || || |||| ||||| || || | || | Sbjct 1661781 ATCAACGGAAAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCCGTTGGTATC 1661722 Query 122949 CACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTC 123008 ||||| ||||||| || || || | ||| || ||| | ||||||||||| || | ||| Sbjct 1661721 CACGGCAGCGACATTGAGAAGGCCATCGAGACCTACAACTTGATGTCTCAGAAGTACTTC 1661662 Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGT 123068 || ||||| || ||| ||||| ||| || || ||| ||| | | || || Sbjct 1661661 ACTCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCCCAGCTCGCCTCTTGC 1661602 Query 123069 TTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGC 123128 || | || | || || |||||||| ||||||||| || ||| || ||| Sbjct 1661601 TTCCTCGTCGACATGAAGGAGGACAGCATTGACGGTATCTACGACACTCTGAAGACCTGC 1661542 Query 123129 GCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCAC 123173 || |||| ||||| | ||| || || || ||||||||||| Sbjct 1661541 GCTATGATCTCCAAGACGGCCGGTGGTATCGGTCTGAACGTGCAC 1661497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003002248600