Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10 134 2e-26 seq5 105 8e-18 >seq10 Length=610536 Score = 134 bits (148), Expect = 2e-26 Identities = 306/454 (67%), Gaps = 10/454 (2%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || ||||||||||| |||||||| ||||| || | || ||| |||||| Sbjct 109812 GTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCAT 109871 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || |||||| | | ||| | | || ||| || || | || Sbjct 109872 GAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCC--AAGGGCCACCAACAGG 109929 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || |||| |||| |||| ||||||| ||||| || ||||||||| || | || | Sbjct 109930 CGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGCAGAGCA 109989 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || || || ||||| | |||| ||| ||||||| | || || || | |||| | Sbjct 109990 CAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCC 110049 Query 127469 TGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--CAG-CAAAC 127525 | || | | | | || | ||| | | || | ||| || ||| | || Sbjct 110050 TCAACAACCTGCTTGCTGGGGCGGTTGT-TCAGGTG--GGAGAACAACAGGCAGGCGAAG 110106 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| |||||||| ||||| |||||||| || || |||||| |||||| |||||| Sbjct 110107 TCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATG 110166 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 ||||| |||||||| | |||||| || | | || || || |||||||| || |||||| Sbjct 110167 AGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCC 110226 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 || ||||| |||| ||||||| || |||| Sbjct 110227 ACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 110260 >seq5 Length=3972810 Score = 105 bits (116), Expect = 8e-18 Identities = 459/718 (64%), Gaps = 16/718 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 1660330 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 1660389 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| || | || | ||||||||||| ||| | || || Sbjct 1660390 GCAGTGGGCATGGGAGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTAGCC 1660449 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 ||||| | ||||||||| || | | | | |||||||| || |||| ||| Sbjct 1660450 TTGAGAGAGTCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 1660509 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||| ||||| | || ||||||||| | ||||| || | ||| ||| || | Sbjct 1660510 ATACCCTGGGAGACAGGAGATCCCTCATAGGTCTCGTAAGTGCCGAACTCCTTGGCAAGA 1660569 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 116201 ||||| || | | ||||| || || ||||| || || | |||| || Sbjct 1660570 TCGGACGAGGCGGTCAAACCAGCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGT 1660629 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGACCTT 116260 || ||||||| | || || || | || || || | | || |||| || ||||| | Sbjct 1660630 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCG-CAGAGCGAGGAAAGCATCAGCCAGACCGT 1660687 Query 116261 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGG 116317 |||||| || |||| || || || | | || ||||| || |||| |||| Sbjct 1660688 TGACACCCAGAGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGG 1660744 Query 116318 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 116377 | || | || | ||||| | | | || || || | | |||| | || | Sbjct 1660745 GGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTACGGACCAAGACCTGGACAACCTCGT 1660804 Query 116378 GAAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 116434 | ||||| | | ||| | | ||||| | || ||| | |||| || || | Sbjct 1660805 GGAGCTTGCCAAAGTCATACTCGCCGCGAGCAGCGTC---GACGAAAGTAGGCAGAGCAA 1660861 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 ||||| || ||||| |||| ||||||| | || ||||||| || || || || | Sbjct 1660862 GGGACGCAAGGTTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGC 1660921 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 | | || || || ||||| || | |||||| || || ||| |||| || |||| Sbjct 1660922 AGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 1660981 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||||| ||||| | || | || ||||| || |||| || |||||||| | ||| Sbjct 1660982 CCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGAATAGCGTACCA 1661039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506931590600