Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq10 194 3e-44 seq5 141 1e-28 >seq10 Length=610536 Score = 194 bits (214), Expect = 3e-44 Identities = 344/498 (69%), Gaps = 9/498 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || ||||||||||| ||| ||| || || || |||||||| |||| ||||| Sbjct 109827 CTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTT 109886 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | ||| ||| |||| || || ||| ||| || | ||| || || || || Sbjct 109887 CGTGGCGTTGTAGTACTTCTTGTTGCCAAGGGCCACCAACAGGCGGTCCGCGACGAACTC 109946 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| |||||| ||| | |||| || |||||||| | ||| || || || | Sbjct 109947 GATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGCAGAGCACAGGGCAGAGCGTCAGT 110006 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACA-CGTTCGTACC 159887 ||| ||||||| |||||| |||| || ||| | || | | ||| | | | | | Sbjct 110007 CAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCCTCAACAACCTGCTTGCT 110066 Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| ||| || |||| |||| ||||| || |||||| |||||| || Sbjct 110067 GGGGCGGTTGTTCAG---GTGGGAG---AACAACAGGCAGGCGAAGTCGGTGTGCAGACC 110120 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || |||||||||| ||||||||| | | | || || ||||||| |||||| || Sbjct 110121 CTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTTCTT 110180 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| || || | |||| || || || ||||||||||| || || || Sbjct 110181 GAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCCACGGCAGCGAAAGC 110240 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 ||||| | || | | || | | | |||| ||| ||||| | ||||||| || || Sbjct 110241 AACGAGACGCTGAGCGAAGGTAGATTCCCTGTCCTGGATCCACTTGATGGCCCAATCGGC 110300 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| || ||||| || Sbjct 110301 CTTCTTGGCAATGCAGGG 110318 >seq5 Length=3972810 Score = 141 bits (156), Expect = 1e-28 Identities = 456/692 (66%), Gaps = 22/692 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| |||| | || | |||| | | | ||| |||||||||| Sbjct 1659942 CTGGTCGACAGTGAACTGGATGG-GCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATGC 1660000 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| | ||| ||| ||| ||| | ||||||| | | |||| || | ||| Sbjct 1660001 CCGTCTTCAAACCCATCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGG 1660060 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | || || ||| ||||| || ||||| ||||| ||||| | | || || || | Sbjct 1660061 GCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCCGCAG 1660120 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTG 204076 |||| | | ||| ||| ||| || |||||||||||||||||| ||| || || || || Sbjct 1660121 CCATCTGCAGAATCGTCCGCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCT-TGATG 1660179 Query 204077 TGT-TGAGGCACATCTTCCC-ACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATC 204133 | || || || || | || ||| || | || ||||| || | | || Sbjct 1660180 TCACTGGGG---ATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTTC 1660236 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | ||| ||||| ||| | | ||| ||| || ||| |||||||| Sbjct 1660237 TTCATGTTGTCCGACCACAGGCCGAGGTCAACCAGGTCCTTCAGCAGCCAGGGGTTGACC 1660296 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | || || | |||| | | | |||| |||| | || ||||| Sbjct 1660297 ACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAG 1660356 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| ||| || |||||| ||| ||||| |||||||||||||| | |||| | Sbjct 1660357 CACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGAGCGACCAGCAAG 1660416 Query 204314 GAGTTGCGCACACCGTATTTTTG--GACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCG 204371 |||||| ||||| | | | | || | | ||| |||||| |||||| | Sbjct 1660417 CTGTTGCGGACACC--AGTCTGGGCGATCTTAGCCTTGAGAGAGTCCCAGTCCCAGAGGT 1660474 Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 || |||| | | ||||||||||| |||||| ||| || || ||| || |||| Sbjct 1660475 CAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAGGAGATCCCT 1660534 Query 204432 TGTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCA---TGGCG 204487 || ||| |||| || || ||| | || || | | ||||||||| || ||| Sbjct 1660535 CATAGGTCTCGTAAGTGCCGA-ACTCCTTGGCAAGATCGGACGAGGCGGTCAAACCAGCG 1660593 Query 204488 TGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 || ||| || ||||| |||||||| | ||| Sbjct 1660594 TG---GTAGATAGTCTCGAAGATCTGGATGTT 1660622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154852119600