Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq10 168 7e-37 seq2 118 1e-21 seq5 116 4e-21 >seq10 Length=610536 Score = 168 bits (186), Expect = 7e-37 Identities = 350/514 (68%), Gaps = 8/514 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || || |||||| |||||||| || || || || ||| | Sbjct 109794 CATGACACCAGCCTTCTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGC 109853 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || || || | ||| || || |||||||| | | |||||||| ||| || | Sbjct 109854 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCC 109913 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT-GGTTTCGCAAT 132769 ||| | || | ||| | ||| || |||||||||||||| || |||| | || | | | Sbjct 109914 AAGGGCCACCAACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAG-AGT 109972 Query 132770 TAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | ||||||||| |||| ||||| || || || || || ||||| ||| |||| Sbjct 109973 TCATGCCCAGCAGA-GCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACG 110031 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 || ||| || ||| ||| ||| | | ||| || || | || || |||| Sbjct 110032 GCCTCGACGATGATGTCCTCAACAACCTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGAAC 110091 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | || ||| || |||||| |||| ||||| || | || ||||| |||||| ||| Sbjct 110092 AACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAG 110151 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 |||| || |||||||| || || || |||||||| || |||| ||||| || || Sbjct 110152 GTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAG 110211 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT--CTT 133066 ||||| | ||||| ||||| |||||||| || || |||| |||| || | || || Sbjct 110212 AAGAAAATACCCTCCACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCCCTG 110271 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| |||||| | ||||| |||||||| Sbjct 110272 TCCTG--GATCCACTTGATGGCCCAATCGGCCTT 110303 >seq2 Length=4967832 Score = 118 bits (130), Expect = 1e-21 Identities = 138/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 3523911 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 3523970 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | || || ||||| | Sbjct 3523971 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTC 3524028 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | |||||||| | ||||||||||||||| | Sbjct 3524029 TTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 3524088 Query 38431 AGG 38433 ||| Sbjct 3524089 AGG 3524091 >seq5 Length=3972810 Score = 116 bits (128), Expect = 4e-21 Identities = 161/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || || || | || || ||| | | Sbjct 3010470 ATGCAGATCTTCGTGAAGACACTCACCGGCAAGACGATTACGCTAGAGGTGGAGAGCTCG 3010411 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | |||| | ||||| || |||| || || ||||| |||||| | || | Sbjct 3010410 GATACTATTGATAACG--TCAAGAACAAGATCCAAGATAAGGAGGGCATTCCCCCGGATC 3010353 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||||| ||| || || |||||||| || | || || ||| |||||||| Sbjct 3010352 AGCAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACA 3010293 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| ||| || ||||| |||||||| ||| Sbjct 3010292 ACATCCAGAAGGAGAGC-ACTCTGCACTTGGTGCTCCGT 3010255 Score = 102 bits (112), Expect = 8e-17 Identities = 126/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| |||||| | | ||| | | | | |||| |||| Sbjct 3011206 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAACG-TTAAG 3011148 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || ||||||| ||||| || || | ||| || Sbjct 3011147 ACCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTGGA 3011088 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || |||||||| || | || ||||| |||||||||||||| ||||| Sbjct 3011087 AAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGA 3011038 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || || ||||||| ||||| ||||| | |||||| || |||||||| Sbjct 3010833 GACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTCGCGGGAAAGCAGCTGGAG 3010774 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | || ||||| ||||||||||||||||||||| | || || || | || || Sbjct 3010773 GATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAATCCACTCTTCACCTCGTCCTT 3010714 Query 38457 CGT 38459 ||| Sbjct 3010713 CGT 3010711 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || ||||| | || || || | || Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| || || | ||||| || || |||||| | ||||| Sbjct 3010638 GACACCATCGATAACG-TTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCA 3010580 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || || || |||||||| || | || ||| | ||||||||| Sbjct 3010579 GCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAA 3010520 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || |||||| |||| || || | || || ||| Sbjct 3010519 CATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGT 3010483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172581174400