Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 394 1e-104 seq7 145 1e-29 seq3 86.0 8e-12 >seq1 Length=6182763 Score = 394 bits (436), Expect = 1e-104 Identities = 775/1138 (68%), Gaps = 15/1138 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | ||| || || ||||| | || ||||| || || |||||||||||||| Sbjct 2354028 TCACCGGACAGGATAGCAGCCTGGACGGCAGCACCGTAGGCAACGGCCTCATCGGGGTTG 2353969 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAAC-ATTTGTTGAATTTTCGG 7128 || | || || || || ||| || | || | | || | | || || || || Sbjct 2353968 ATGGACTTGTTGGCGTCCTT---GTTGAAGAAGTC-GCTGACGAGACGCTGGATCTTGGG 2353913 Query 7129 GATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGA 7188 ||| || || || |||||||||| ||||| || | || || || |||||||| | Sbjct 2353912 GATACGGGTGGAACCACCGACCAGGACGATCTCGTGGACGGAGGACTTGTCGATCTTGGC 2353853 Query 7189 GTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248 ||| ||||| || || || ||||| |||||| | |||| || || || Sbjct 2353852 GTCACGAAGGACACGCTCAACGGGCTCCATGGTGGAACGGAAGAGGTCCTGGCAGAGCTC 2353793 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| ||||| ||||| || ||||| || ||||| || | || ||| | | || || || Sbjct 2353792 CTCGAAACGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGAGAGTCGAT 2353733 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 ||||||| || || || | ||||| | || ||||| || ||||| || || || || Sbjct 2353732 CTCAATGGAGGTCTGGGCAGCGGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCGGTGCG 2353673 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | |||||| || ||||| | ||| || | || ||||| || || || || ||||| Sbjct 2353672 GAGACGACGGAGAGCACGAGCGTTGGAGGTGAGGTCCTTCTTGTGCTTGCGCTTGAACTC 2353613 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 | |||||| | ||| | || || || |||||||||||||| || || || Sbjct 2353612 GTTGACGAAGTGGTTGACGAGGCGGTTGTCAAAGTCCTCACCACCCAAGTGAGTGTCACC 2353553 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| || |||||||| | |||||| | | | |||||||| || || Sbjct 2353552 AGCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAGGAGGGAAACATCGAAGGT 2353493 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 ||||||||| || || || ||||| ||||| || | || ||||| || ||||| Sbjct 2353492 ACCACCACCAAGATCGAAGATGAGGACGTTGCGCTCACCCTCGGCCTTCTTGTCCAGACC 2353433 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| || || || || || || || || || || ||||| ||| ||||||||| ||||| Sbjct 2353432 GTAGGCAATGGCAGCAGCGGTGGGCTCGTTGATGATACGGAGAACGTTCAGGCCGGCAAT 2353373 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 | ||||| || || || || || || || ||||| |||||||| ||||| || | Sbjct 2353372 GAGACCAGCATCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACAGTGAT 2353313 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| |||| |||| | |||||| || | || ||| | || ||| ||||| || Sbjct 2353312 GACAGCGTTGTTGACGGTGCCACCGAGGTAAGCCTCAGCGGTCTCACGCATCTTGGTGAG 2353253 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 | ||| || || | ||| || | | ||||| || | || || || || ||||| || Sbjct 2353252 GATCATGGAGGAGACCTCCTCGGGAGTGAACTGCTTGGACTCGCCCTTGAACTCAACCTC 2353193 Query 7849 AATCATGGGTTTATC-CGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907 | ||||| || | | | | | || |||||| | | ||| | ||||| ||| Sbjct 2353192 GACGATGGGCTTGCCACCCTTCTC----GACAACCTTGAAGGGCCAGTGCTTCATGTCGG 2353137 Query 7908 CTTGGACCTGTTGGTC-CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966 ||||||| ||| | ||||| | ||||| |||||||| ||||| || || ||| Sbjct 2353136 ACTGGACCTCAGCGTCGCCAAAAC-GACGACCGATCAGACGCTTAGCATCGAAGACGGTG 2353078 Query 7967 TTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTT 8026 || | |||||||||||| |||||||| || || || ||||| ||||| || | Sbjct 2353077 TTGTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCGATGAGACGCTC---GGTG 2353021 Query 8027 TCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCT 8086 || || || || ||| | || ||||| || || || || |||||||| || || ||||| Sbjct 2353020 TCGGTGAAAGCCACGAAAGAGGGGGTAGTGCGGTTACCCTGGTCGTTGGCGATGATTTCA 2352961 Query 8087 ACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 | |||||| | | |||| || || || || || || ||||| ||||| ||||||| Sbjct 2352960 ATGCGGTCATCACGGAAGACACCCACACAGGAGTAGGTGGTTCCCAAATCGATACCGA 2352903 >seq7 Length=3194316 Score = 145 bits (160), Expect = 1e-29 Identities = 359/542 (66%), Gaps = 7/542 (1%) Strand=Plus/Minus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| || |||||||| ||||| || || || | | ||| || |||| ||| | | || Sbjct 1058298 CAGGTCTTCAAAACGAGCACGAGTGATAGAAGAGTTGAAGTCCTCGCCATCGAACAGAGA 1058239 Query 7303 ATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 || ||||| | || || || | ||| | || || || ||||| || ||||| || Sbjct 1058238 GTCGATTTCCACAGTAGTCTGGGTAGCGTTG--GACAAAGTACGCTTAGCACGCTCGCAG 1058181 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || |||| | |||||| ||||| | || || |||||| | || || | || || Sbjct 1058180 GCGGTTCTGAGACGACGGAGGGCTCTCGCGTCACCGGAGAGGTCCTTGCCAGTCTTGCGC 1058121 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | |||||| ||||| | | |||||| |||| |||||| | ||| Sbjct 1058120 TGGAACTCCTTCTTGAAGTGGTCCAGGAGGTTGGTATCGAAGTCTTGACCACCAAGGTGG 1058061 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || || || || ||||| |||| ||| || | ||||| | | || ||| Sbjct 1058060 GTATCTCCAGCAGTAGCCTTGACAGTGAAGACACCACCCTGGATGTTAAGGAGAGACACA 1058001 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTGTTC 7597 || || ||||||||||| || || | ||||| ||||| || | || ||| Sbjct 1058000 TCGAAAGTACCACCACCAAGATCGTAGATGAGAACGTTACGCTCCTTATCAGACTTGCCG 1057941 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 | || || || || || || || || || || || || || ||||| || |||| Sbjct 1057940 GAGCCAAGGCCATAGGCAATCGCTGCTGCAGTGGGCTCGTTGATGATACGGAGCACGTTC 1057881 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 || |||||||| | | ||||| || || || || || || ||||| || || || Sbjct 1057880 AGACCAGCAATGGCACCAGCATCCTTAGTAGCCTGGCGCTGGTTGTCGTTGAAATAAGCG 1057821 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 || || || | ||| || | | ||| ||||| ||||| | | ||| || | |||||| Sbjct 1057820 GGCACGGTAATGACTGCCTTCTCGACCTTCTTTCCGAGCTTGGTTTCGGCAACCTCTTTC 1057761 Query 7778 AT 7779 || Sbjct 1057760 AT 1057759 >seq3 Length=4809046 Score = 86.0 bits (94), Expect = 8e-12 Identities = 213/321 (66%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 184052 AGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTCATGATCATGAGTCTTCCGTAT 184111 || |||||||| ||||| || |||| ||| ||| ||||||||||| | ||||| Sbjct 3585273 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAGTGGCCGTAC 3585214 Query 184112 CTGAGTTCG-GAGAGTGATGTATACACTTTCCCTTGCTGAAGCCCCAAAATCTTTTTAAG 184170 | || || | | || | |||||| | ||| ||||| || ||||| | || || | Sbjct 3585213 CGAAGGCCGCGGGTGTCA-GTATACTCCTTCTTGTGCTGCAGACCCAAGAAGTTCTTGAT 3585155 Query 184171 ATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTACA 184230 || | || |||| ||| | | | || | | | || ||||| ||||| | Sbjct 3585154 ATTTTGAATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGCAA 3585095 Query 184231 TTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAAT 184290 ||| || | |||||| || |||||| || |||| |||||||||| | ||||||| || Sbjct 3585094 TTTTCCTCGAAGCGGGAACACACCGAAAAGATCCGGACCAACAACCGCTCGACCAGCCAT 3585035 Query 184291 TGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGT 184350 || || || || || |||||||| || | || || || || | | || | Sbjct 3585034 GGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCAGTGATGGCCGTCCTT 3584975 Query 184351 GGTACCGGCTTTATTGGCATC 184371 ||| ||||| || |||||||| Sbjct 3584974 GGTGCCGGCCTTGTTGGCATC 3584954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132522129400