Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 seq3 100 4e-16 >seq10 Length=610536 Score = 138 bits (152), Expect = 1e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 102167 |||| || || ||| ||||| || |||||||| || |||||| | | ||| | Sbjct 110323 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAAT 110264 Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227 | | |||| ||| |||| ||| | || || || || |||||||| |||||||| ||| Sbjct 110263 C-TACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205 Query 102228 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 |||||| | || | |||||||||||||| ||||||||||| ||||| ||||||| Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||||||||| ||||| || ||| Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCAC 110112 >seq3 Length=4809046 Score = 100 bits (110), Expect = 4e-16 Identities = 226/335 (67%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 || ||||||||||| |||||||| ||| ||| ||||||||||| | | || ||| Sbjct 3585273 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAGTGGCCGTAC 3585214 Query 176792 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 176851 ||||| || || ||| ||||| || || |||||||||| ||||||| | Sbjct 3585213 CGAAGGCCGCGGGTGTCAGTATACTCCTTCTTGTGCTGCAGACCCAAGAAGTTCTTGATA 3585154 Query 176852 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910 | ||||| || ||||| | || ||| || ||| |||||||| || || | Sbjct 3585153 T-TTTGAATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGCAA 3585095 Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 || || ||||| ||||| |||||| | |||| ||||||| || | |||| || | Sbjct 3585094 TTTTCCTCGAAGCGGGAACACACCGAAAAGATCCGGACCAACAACCGCTCGACCAGCCAT 3585035 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT--TGCCAGATTGT 177028 || || || || || ||||| ||||||| ||| || || || | || | | | Sbjct 3585034 GGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCAGTGATGGCCGTCCTT 3584975 Query 177029 GCCGTACCCGCCTTGTTCGCATCATCCAATTTGGG 177063 | || || |||||||| ||||| ||| ||||| Sbjct 3584974 G--GTGCCGGCCTTGTTGGCATCCGTCAACTTGGG 3584942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742128425200