Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq10 138 1e-27
seq3 100 4e-16
>seq10
Length=610536
Score = 138 bits (152), Expect = 1e-27
Identities = 160/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 102167
|||| || || ||| ||||| || |||||||| || |||||| | | ||| |
Sbjct 110323 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAAT 110264
Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227
| | |||| ||| |||| ||| | || || || || |||||||| |||||||| |||
Sbjct 110263 C-TACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205
Query 102228 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
|||||| | || | |||||||||||||| ||||||||||| ||||| |||||||
Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145
Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||||||| ||||||||||| ||||| || |||
Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCAC 110112
>seq3
Length=4809046
Score = 100 bits (110), Expect = 4e-16
Identities = 226/335 (67%), Gaps = 6/335 (2%)
Strand=Plus/Minus
Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791
|| ||||||||||| |||||||| ||| ||| ||||||||||| | | || |||
Sbjct 3585273 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAGTGGCCGTAC 3585214
Query 176792 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 176851
||||| || || ||| ||||| || || |||||||||| ||||||| |
Sbjct 3585213 CGAAGGCCGCGGGTGTCAGTATACTCCTTCTTGTGCTGCAGACCCAAGAAGTTCTTGATA 3585154
Query 176852 TCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910
| ||||| || ||||| | || ||| || ||| |||||||| || || |
Sbjct 3585153 T-TTTGAATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGCAA 3585095
Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970
|| || ||||| ||||| |||||| | |||| ||||||| || | |||| || |
Sbjct 3585094 TTTTCCTCGAAGCGGGAACACACCGAAAAGATCCGGACCAACAACCGCTCGACCAGCCAT 3585035
Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT--TGCCAGATTGT 177028
|| || || || || ||||| ||||||| ||| || || || | || | | |
Sbjct 3585034 GGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCAGTGATGGCCGTCCTT 3584975
Query 177029 GCCGTACCCGCCTTGTTCGCATCATCCAATTTGGG 177063
| || || |||||||| ||||| ||| |||||
Sbjct 3584974 G--GTGCCGGCCTTGTTGGCATCCGTCAACTTGGG 3584942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742128425200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |