Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 seq5 118 1e-21 seq10 111 2e-19 seq6 86.0 7e-12 seq9 84.2 3e-11 seq3 84.2 3e-11 >seq1 Length=6182763 Score = 122 bits (134), Expect = 1e-22 Identities = 340/514 (66%), Gaps = 37/514 (7%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||| || || || ||||| | ||||| | ||| |||| ||| | ||| ||| | Sbjct 1538920 CGATCAAATCGTCCAGGGCGCATCAGAGCTTGATCGAGAACGTCGGGCCTGTTCGTACCA 1538979 Query 11563 GCAATGACTACAA--TGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | || || | ||| | | ||| ||||||||||||||| || | || ||||| Sbjct 1538980 GCCAACACCACCACTTGCTCGGA--AGTGTTGAAACCGTCCATTTCGGTCAAAATCTGGT 1539037 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACG----CTTC--- 11673 ||| || ||||||||||||||| ||||| |||| | |||| Sbjct 1539038 TGAGGGTGCTCTCACGCTCATCGTTG---------CCACC-GCCGTAGTTGGACTTCGCT 1539087 Query 11674 ------TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGC--AC 11725 ||||||| ||| ||||| ||||||||||| | || || || || | | | Sbjct 1539088 CTTGATTTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGG--CGTCGACTTCC 1539145 Query 11726 GTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785 | || | | || || ||||| || || | || ||||| ||||||||||| |||| Sbjct 1539146 GCGCGTTGGCAAACAGATCACGAACTCGGGAAGGACCGACACCGACGAACATCTCGACGA 1539205 Query 11786 AGTTTGCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 | | || || |||||||| |||||| || || |||||||| |||| || Sbjct 1539206 ACTCTGAACCACTGACACTGAA-GAAGGGCACGCCGGATTCACCAGCTGTGGCCTTGGCA 1539264 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 || | |||||||| ||||| || | ||| | ||| | || |||||||| ||||| ||| Sbjct 1539265 AGTAACGTCTTACCGGTACCCGGAGGACCCGAGAGGATCGCACCACGGGGAATCTTAGCA 1539324 Query 11905 CCA--CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCT 11962 ||| |||| | | || || || ||||| |||||| || | ||| | |||| Sbjct 1539325 CCAAGCTTC--TGGAAACGTTCCGGGTTCTTCAGGAAGCTGACGAATTCCATGATTTCCA 1539382 Query 11963 CCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 ||||||| ||| ||||| | || |||| ||| Sbjct 1539383 CCTTGGCTTCGTCCATACCGGCCACGTCGGAGAA 1539416 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/91 (82%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 6019994 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 6019935 Query 136776 TGGGAACAGCTTTTAGATATATTTTTTGTAT 136806 ||||| || ||||| | ||||||||||| Sbjct 6019934 TGGGACCATCTTTTTG--CAATTTTTTGTAT 6019906 >seq5 Length=3972810 Score = 118 bits (130), Expect = 1e-21 Identities = 380/581 (65%), Gaps = 9/581 (2%) Strand=Plus/Plus Query 110545 CCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCC 110604 ||||| ||||||| | || || | || ||| ||||| |||| ||| | || | Sbjct 1661165 CCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTCCAGTCACCGTTC 1661224 Query 110605 TCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACG-GCA 110663 ||||||| | |||||||||||| || || |||||| || |||| || ||||| || Sbjct 1661225 GCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGCT 1661284 Query 110664 ACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTG 110723 || |||| || | ||| ||||| || || |||| || || | || ||||||||| Sbjct 1661285 CTGA-CCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTG 1661343 Query 110724 CCATGGTTCGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATA 110780 ||| || || || |||| |||| | || ||| || |||||| ||| || Sbjct 1661344 CCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTA 1661403 Query 110781 GCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGT 110840 | || ||| |||||||| | |||||||||| || || | ||| ||| || || Sbjct 1661404 TCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGT 1661463 Query 110841 ACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGC 110900 ||| | ||| ||| | | | ||| ||| ||| | | || ||| |||||||| || Sbjct 1661464 ACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGC 1661523 Query 110901 CCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTG 110959 | ||| || || || ||| | || || | || ||||| ||||| || Sbjct 1661524 CGTCTTGGAGATCATAGCGCAGGTCT-TCAGAGTGTCGTAGATACCGTCAATGCTGTCCT 1661582 Query 110960 CCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGA 111019 |||| || | | || |||||||| | | ||| || | || || || || ||||| | Sbjct 1661583 CCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACA 1661642 Query 111020 GTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCG 111078 | || || | || ||| |||| || | || |||||| |||||| || |||| || Sbjct 1661643 GAGTCGGGGAGGCGTGAGTGAA-GTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCC 1661701 Query 111079 GAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCAT 111119 | || | ||||| ||||||| |||||| ||||| Sbjct 1661702 TTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCAT 1661742 >seq10 Length=610536 Score = 111 bits (122), Expect = 2e-19 Identities = 338/513 (66%), Gaps = 11/513 (2%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||||||||||| ||| || ||||| || |||||||| | || ||||| ||||| Sbjct 109813 TAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATG 109872 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || ||| ||| || | | | |||| |||| || || || Sbjct 109873 AAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTG-CCAAGGGCCACCAACAGGCG 109931 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 || | ||| ||||||| || | | ||||| | || ||||| || | ||| ||| Sbjct 109932 GTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGCAGAGCACA 109991 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 || ||||| || | ||| | || ||| || | || || || | |||| | Sbjct 109992 GGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCCTC 110051 Query 119447 AATAGTTTCTG-TCGATGGTTTGTTTCT-CAAGAGTTTAAACAACTCTACGGCAAATTCT 119504 || | ||| | | ||| | || | || | | |||||| ||| || || Sbjct 110052 AACAAC--CTGCTTGCTGGGGCGGTTGTTCAGGTGGGAGAACAACAGGCAGGCGAAGTCG 110109 Query 119505 TGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGT 119564 || || || ||||| |||||||||||||| || |||| || ||||||||||| Sbjct 110110 GTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGA 110169 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || | ||||| ||||| ||||||| | || || || ||||| || |||||||| Sbjct 110170 CCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCCACG 110229 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAG 119680 |||||||| | ||||||| ||| ||||| || | |||| || |||||||| Sbjct 110230 GCAGCGAAAGCAACGAGACGCTGAGC-GAAGGTAGATTCCCTGTCCTGGATCCACTTGAT 110288 Query 119681 AGCCCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||||| | |||||| | ||||||||||| Sbjct 110289 GGCCCAATCGGCCTTCTTGGCAATGCAGGGGAC 110321 >seq6 Length=3949434 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 3346172 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 3346113 Query 136776 TGGGAACAGCTTTTAGATATATTTTTT 136802 ||||| || ||||| | | | | |||| Sbjct 3346112 TGGGACCATCTTTTTGGTTTTTGTTTT 3346086 >seq9 Length=730656 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 376466 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 376525 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 376526 TGGGACCATCTTTT 376539 >seq3 Length=4809046 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 3450723 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 3450782 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 3450783 TGGGACCATCTTTT 3450796 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4437555 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4437496 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4437495 TGGGACCATCTTTT 4437482 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4438272 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4438331 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4438332 TGGGACCATCTTTT 4438345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975742323000