Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 seq10 102 1e-16 >seq5 Length=3972810 Score = 150 bits (166), Expect = 2e-31 Identities = 567/890 (64%), Gaps = 62/890 (7%) Strand=Plus/Plus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || || ||||| ||||||| | | ||||||| | || || || || | |||||| Sbjct 1660873 TTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAG 1660932 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || || || || | ||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct 1660933 CTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGC 1660992 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATC--GGC- 106653 ||| |||| | || ||||| ||||| | || ||||| || | ||||| | || ||| Sbjct 1660993 ATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGAATAGCGTACCACAGCTTCTGGGCC 1661052 Query 106654 -GGCTGGTACAATGGCGTTGGCC--------CGTCCCT---------------------- 106682 | |||||| | ||| |||| | | ||| Sbjct 1661053 TTGATGGTACGACGGCCACGGCCTTCCTTCTCATACCTACAATACTGTTAGCACGAGTCG 1661112 Query 106683 ------------CCGCC--TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC 106728 ||| | | ||||| |||||| || || ||||| ||||| | Sbjct 1661113 ACGATACACAACCCGACAAACTTACTTCTCGTAGAGAGCGTCGAACTCGTCACCGTAGAC 1661172 Query 106729 GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAAC 106788 || | | || || || | || || ||||| || | ||| | ||| | ||||||| Sbjct 1661173 ATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTCCAGTCACCGTTCGCCTCAAC 1661232 Query 106789 CCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCT 106847 ||||||||||| || || || ||||||||| | || ||||| | | | | || ||| Sbjct 1661233 ACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGCTCTGA-CCT 1661291 Query 106848 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 106907 | || | ||| ||||| || | || |||||||| | || ||||| |||||| |||| Sbjct 1661292 CCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAGGGCT 1661351 Query 106908 CAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCG 106961 |||| |||| |||| || | ||||| ||| | || | || || | | Sbjct 1661352 CAAGGTAGATGGCGA---ATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGG 1661408 Query 106962 CTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCC 107021 | ||| ||| || || |||||||| |||| || ||| | || ||| || || || | Sbjct 1661409 CAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCAC 1661468 Query 107022 GAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 107081 ||| || | | | | | || | || || || ||||| || ||| || Sbjct 1661469 CAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCT 1661528 Query 107082 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 107141 | ||||| || || | | ||||| | |||||||||| || ||||||||| Sbjct 1661529 TGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCA 1661588 Query 107142 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTG 107201 || ||| ||||||||| || | ||| || || |||||||| ||||| || || | Sbjct 1661589 TGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCG 1661648 Query 107202 GTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 107260 | | |||||| |||| ||| | || |||||| || ||| ||||| | | | ||| Sbjct 1661649 GGGAGGCGTGAGTGAA-GTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCA 1661707 Query 107261 ATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||||| |||||||| || | ||| |||||||| | || || ||||| Sbjct 1661708 ATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGG 1661757 >seq10 Length=610536 Score = 102 bits (112), Expect = 1e-16 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| ||||||||||| || || || || || || |||||| || || ||||||||||| Sbjct 110112 GTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACC 110171 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| || ||||||||||| ||||||||||| Sbjct 110172 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCCACGGC 110231 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAACCATTTCAT 117461 || || |||| || |||| ||||||| ||| | |||| | ||| || || Sbjct 110232 AGCGAAAGCAACGAGACGCTGAGCGAAGG---TAGATTCCCTGTCCTGGATCCACTTGAT 110288 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | |||||||| |||| || || || Sbjct 110289 GGCCCAATCGGCCTTCTTGGCAATGCAGGGGAC 110321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980541883400