Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5 156 9e-33 seq2 95.1 3e-14 seq1 95.1 3e-14 >seq5 Length=3972810 Score = 156 bits (172), Expect = 9e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990 ||||||||||| || || || || ||||| ||||| |||| |||| || | ||||| || Sbjct 3010490 ACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAG-GTACGGCCATCCTC 3010548 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||||| || ||||| | || || ||||| || ||||||||||| |||||||| Sbjct 3010549 CAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTG 3010608 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || |||||||| ||| ||| ||||| | || | |||||| Sbjct 3010609 AATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTT 3010668 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || ||||| | ||||| Sbjct 3010669 TCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| |||||| ||| || || || ||||| |||| || || | |||||||| ||||| Sbjct 3010267 GTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCCAGCTG 3010326 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| ||||| || || || || || || || |||||||| || || ||||| || || Sbjct 3010327 CTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGGATCTT 3010386 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||||||| ||||| || ||||| || ||||| || || |||| |||||| || || Sbjct 3010387 GTTCTTGACGTTATCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTCTTGCCGGT 3010446 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 3010447 GAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 143 bits (158), Expect = 6e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||||| || ||||| || ||||| || | || || | ||||| || Sbjct 3010718 ACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 3010777 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| ||||| || ||||| ||| Sbjct 3010778 AGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGA 3010837 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| ||| ||||| |||||||| | |||||| Sbjct 3010838 ATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTT 3010897 Query 195112 CCTGTCAAAGTTTTTACGA 195130 || |||| || || |||| Sbjct 3010898 CCGGTCAGGGTCTTGACGA 3010916 >seq2 Length=4967832 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| || ||||||||||| ||||||||| Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || || || || || || || || ||||| || || || ||||||||| || Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3523970 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || || | || || ||| Sbjct 3523969 ATGGTGTCGCTCGA---CTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 3523913 Query 195130 AA 195131 || Sbjct 3523912 AA 3523911 >seq1 Length=6182763 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| || | |||||| | || || ||| Sbjct 4512399 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCG 4512458 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||||||||||| |||||||| || || || ||||| || || || || || |||||| Sbjct 4512459 AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCT 4512515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481102466845