Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 167 4e-36 seq10 125 1e-23 >seq5 Length=3972810 Score = 167 bits (184), Expect = 4e-36 Identities = 378/560 (68%), Gaps = 14/560 (3%) Strand=Plus/Plus Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 ||| ||||| ||| |||| |||||||| | || ||| ||| || | ||| Sbjct 1661143 GTAGAGAGC--GTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGG 1661200 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 || | ||| |||||| ||| | | || | || |||||| || |||||| ||||| Sbjct 1661201 CAGAACAGGGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCAC 1661260 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 || || | || ||||| | | | ||| ||||||| |||| ||| || | |||| Sbjct 1661261 AGGGCGTAGAACAGATCACGAG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGAT 1661318 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 ||| |||||||| | || | |||||| ||||| || |||| ||| | || ||||| | Sbjct 1661319 CCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGAC 1661378 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGT 222238 |||||||||||||||| || || || ||| | |||||||| ||||| | || Sbjct 1661379 GCTTGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAGACACGAAGCATAGGA 1661437 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 || || |||||||| ||||||||| || |||||| | ||| | || | Sbjct 1661438 ACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGG---AGCCAGTAGAACGGATG 1661494 Query 222299 CTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | | ||| || |||||||||||||| || |||||||| |||||| |||| ||| Sbjct 1661495 CGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGA 1661554 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| ||| || || || ||||||||| | || | || || ||||| | | | Sbjct 1661555 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGC 1661614 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 || | | || | || ||||| ||||| || || |||||| || ||||| | | Sbjct 1661615 TGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGA 1661674 Query 222476 GACATCAGATCGTACGTCTC 222495 ||||||| | ||| ||||| Sbjct 1661675 GACATCAAGTTGTAGGTCTC 1661694 >seq10 Length=610536 Score = 125 bits (138), Expect = 1e-23 Identities = 326/495 (66%), Gaps = 17/495 (3%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| ||||||||| | | ||| | |||| || | |||| || || || || Sbjct 110294 TGGGCCATCAAGTGGATCCAG-GACAGGGAATCTACCTTCGCTCAGCGTCTCGTTGCTTT 110236 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||| |||||||| || || ||| |||||| || || ||||||||||||||||| | Sbjct 110235 CGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAA 110176 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || ||| ||| ||||||||||||||| | || |||||||| Sbjct 110175 GCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCT 110116 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG- 26071 |||| || || ||||||||| | | | | |||| || | || || |||| Sbjct 110115 GCACACCGACTTCGCCTGCCTGTTGTTCTC---CCACCTGAACAAC-CGCCCCAGCAAGC 110060 Query 26072 AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNN 26131 || || | |||||| ||||| || | || ||| ||||||| | Sbjct 110059 AGGTTGTTGAGGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACG 110000 Query 26132 NNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATG 26191 ||||||||||| | || ||| |||| ||||| |||| | Sbjct 109999 CTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCG 109940 Query 26192 TGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGA--CTCTACAGTACGC--CTAA 26246 | || |||| ||| | ||| | ||| | | ||| ||||| |||| | || Sbjct 109939 TCGCGGACCGCCTGTTGGTGGCCCTTGGCA---ACAAGAAGTACTACA--ACGCCACGAA 109885 Query 26247 CCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAG 26306 ||| |||||||| ||||| || ||| ||| || ||||||||||||||||| ||| | Sbjct 109884 CCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTTGAGAAGCG 109825 Query 26307 GGTCGGCGACTATCA 26321 ||| || ||||| || Sbjct 109824 GGTGGGTGACTACCA 109810 Score = 102 bits (112), Expect = 2e-16 Identities = 164/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||||||||| || |||||||| Sbjct 110708 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 110649 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| |||| | ||| || | | ||||||| | || || Sbjct 110648 TCCAAGGATTTGCACGACTGGCACAACCGC-CTGAACGACGACGAGCGCTACTTCATCTC 110590 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| ||||| || || |||||||| || |||| | Sbjct 110589 CCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTCGTCGAGCG 110530 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || ||| | ||||| || ||||||||||||||||| Sbjct 110529 CTTCAGCGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGAT 110476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844393630400