Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 seq10 102 1e-16 >seq5 Length=3972810 Score = 107 bits (118), Expect = 2e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||| | || | ||||| ||||||||| Sbjct 1661039 TGGTACGCTATTCTGGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACAAGGAT 1660980 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||| ||||||||||| ||||| ||||| | ||||| ||| ||||| || || ||| Sbjct 1660979 GCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAACCTCTGC 1660920 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 || || || | ||||||| | | ||||||| ||||| || || Sbjct 1660919 ACTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGTAA 1660873 >seq10 Length=610536 Score = 102 bits (112), Expect = 1e-16 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTCT 65064 || || || |||| |||||||| | ||||| || || ||| | |||| | ||| Sbjct 110321 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCT 110262 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 ||||||| |||| || |||| || || ||||||||||| ||||||||||| Sbjct 110261 A---CCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205 Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184 || ||| | || | ||| | |||||||| ||||||||||| || || |||||| Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145 Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || || || || ||||||||||| ||| Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCAC 110112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569339000800