Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 120 9e-22
seq10 104 7e-17
seq1 104 7e-17
>seq5
Length=3972810
Score = 120 bits (132), Expect = 9e-22
Identities = 403/624 (65%), Gaps = 5/624 (1%)
Strand=Plus/Plus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
||||||| ||| || | ||| | ||| | || ||||| || || | || | ||||
Sbjct 1661231 ACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGC-TCTGAC 1661289
Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028
||||| | ||||| ||||| || || || | ||| || | ||| | || ||
Sbjct 1661290 CTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAGGG 1661349
Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085
||| || || || || || ||| | | | ||||||||||| || || || | ||
Sbjct 1661350 CTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGC 1661409
Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145
||| || |||||||||| |||||||||| || ||| ||||| || || ||||| || |
Sbjct 1661410 AGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACC 1661469
Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205
||| | || |||| || || | || | | || || |||||||| | | ||
Sbjct 1661470 AATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTT 1661529
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || |||||| ||| | ||| | | | ||||| ||||| || || | |||
Sbjct 1661530 GGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCAT 1661589
Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
| || |||| || | || || | || || ||||||||||| || || ||
Sbjct 1661590 GTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGG 1661649
Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
| || ||| | || ||||| | |||||| | | ||| ||||| | ||||||||
Sbjct 1661650 GGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAAT 1661709
Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445
| ||||| |||| | | || | |||| || ||||| |||||||| | |
Sbjct 1661710 GTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 1661769
Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505
| ||| | || |||| ||||| | || |||| ||| || || ||||| | | |
Sbjct 1661770 CTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCTTGAAACCGAAGAAGTTGTA 1661829
Query 156506 CAGAAAATCACGGTTGTAATCAAT 156529
|||||||||| ||| ||||
Sbjct 1661830 GTTGAAATCACGGTCGTATACAAT 1661853
Score = 87.8 bits (96), Expect = 5e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATC 155642
||| ||| ||||| || ||||| || ||| ||| | | ||||| || | |||
Sbjct 1660855 AGAGCAAGGGACGCAAGGTTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATC 1660914
Query 155643 TCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTA 155702
||| ||| ||||| || || |||||| || | ||||||||||| || ||||
Sbjct 1660915 TCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTG 1660974
Query 155703 CAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758
|||||||||||||| || ||| | ||| | || ||||| |||| || ||||||||
Sbjct 1660975 CAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGAAT 1661030
>seq10
Length=610536
Score = 104 bits (114), Expect = 7e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510
||||| | || ||||| || || ||||||||||||| | | | || ||| |||
Sbjct 110306 AAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACCTTCGCTCAGCGT 110247
Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570
||||||||||| |||| || ||||| ||||| ||| ||| | ||| || || ||
Sbjct 110246 CTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 110187
Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630
||||| || ||||||||| | | ||||| ||| || || ||||| || || || |
Sbjct 110186 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 110127
Query 133631 GACGAGGCACTTCACACCGAATTTGCC 133657
|| |||| || |||||||| || |||
Sbjct 110126 GATGAGGGTCTGCACACCGACTTCGCC 110100
>seq1
Length=6182763
Score = 104 bits (114), Expect = 7e-17
Identities = 177/252 (70%), Gaps = 6/252 (2%)
Strand=Plus/Minus
Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654
||| || || ||||||||| || || || ||||| |||||||| | ||| | | |||
Sbjct 5162316 ACGTTGGATGTAACCAGTTTCAGCGGTCTTGACAGCGGTATCAATCAAACCTTCTCTACC 5162257
Query 302655 ACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712
| |||| || |||||||| | ||| | |||| | | | | |||| ||| | |||
Sbjct 5162256 AGCCATGGCGTGGAAGAAAAACTCGGTGGGGGTCAAACCACGCAGATAA--GAGTTTTCA 5162199
Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772
|| || ||||| | ||||| || | ||| |||||| ||||| |||| ||| | || |
Sbjct 5162198 ACAAATCCACGGGATTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGCAAGGTACGGTAC 5162139
Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCAT 302831
| | ||| | || ||||||||||| || || ||| ||||| | ||| | | ||||
Sbjct 5162138 TTGAATCCGAAAGGAATACGCTTTCCTTCGACTGACTGTTGTCCGA-CCACAGCAGTCAT 5162080
Query 302832 CTGCGAAATATT 302843
||| ||||| ||
Sbjct 5162079 CTGGGAAATGTT 5162068
Score = 100 bits (110), Expect = 8e-16
Identities = 107/141 (76%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
|| |||||| | | ||| |||||||| ||| ||||| ||| |||| ||||||||
Sbjct 5163114 CAAAATTTCCTTTAGACGAGGAACACCCAAGGTGACGTT---CTTAGACGAGACACCAGC 5163058
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
|||||||||||| ||||| || | || || | |||||||||||| || || ||||
Sbjct 5163057 AAAGTGGAAAGTGTTCAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGAGCAGCAAG 5162998
Query 301932 CATACCAACCATTTCTCCTGG 301952
|| |||||||||||| || ||
Sbjct 5162997 CACACCAACCATTTCGCCAGG 5162977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816939981795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |