Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 120 9e-22 seq10 104 7e-17 seq1 104 7e-17 >seq5 Length=3972810 Score = 120 bits (132), Expect = 9e-22 Identities = 403/624 (65%), Gaps = 5/624 (1%) Strand=Plus/Plus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 ||||||| ||| || | ||| | ||| | || ||||| || || | || | |||| Sbjct 1661231 ACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGC-TCTGAC 1661289 Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||||| | ||||| ||||| || || || | ||| || | ||| | || || Sbjct 1661290 CTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAGGG 1661349 Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085 ||| || || || || || ||| | | | ||||||||||| || || || | || Sbjct 1661350 CTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGC 1661409 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| || |||||||||| |||||||||| || ||| ||||| || || ||||| || | Sbjct 1661410 AGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACC 1661469 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||| | || |||| || || | || | | || || |||||||| | | || Sbjct 1661470 AATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTT 1661529 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || |||||| ||| | ||| | | | ||||| ||||| || || | ||| Sbjct 1661530 GGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCAT 1661589 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || |||| || | || || | || || ||||||||||| || || || Sbjct 1661590 GTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGG 1661649 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | || ||| | || ||||| | |||||| | | ||| ||||| | |||||||| Sbjct 1661650 GGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAAT 1661709 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 | ||||| |||| | | || | |||| || ||||| |||||||| | | Sbjct 1661710 GTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 1661769 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505 | ||| | || |||| ||||| | || |||| ||| || || ||||| | | | Sbjct 1661770 CTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCTTGAAACCGAAGAAGTTGTA 1661829 Query 156506 CAGAAAATCACGGTTGTAATCAAT 156529 |||||||||| ||| |||| Sbjct 1661830 GTTGAAATCACGGTCGTATACAAT 1661853 Score = 87.8 bits (96), Expect = 5e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 155583 AGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATC 155642 ||| ||| ||||| || ||||| || ||| ||| | | ||||| || | ||| Sbjct 1660855 AGAGCAAGGGACGCAAGGTTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATC 1660914 Query 155643 TCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTA 155702 ||| ||| ||||| || || |||||| || | ||||||||||| || |||| Sbjct 1660915 TCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTG 1660974 Query 155703 CAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758 |||||||||||||| || ||| | ||| | || ||||| |||| || |||||||| Sbjct 1660975 CAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGAAT 1661030 >seq10 Length=610536 Score = 104 bits (114), Expect = 7e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510 ||||| | || ||||| || || ||||||||||||| | | | || ||| ||| Sbjct 110306 AAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACCTTCGCTCAGCGT 110247 Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570 ||||||||||| |||| || ||||| ||||| ||| ||| | ||| || || || Sbjct 110246 CTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 110187 Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630 ||||| || ||||||||| | | ||||| ||| || || ||||| || || || | Sbjct 110186 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 110127 Query 133631 GACGAGGCACTTCACACCGAATTTGCC 133657 || |||| || |||||||| || ||| Sbjct 110126 GATGAGGGTCTGCACACCGACTTCGCC 110100 >seq1 Length=6182763 Score = 104 bits (114), Expect = 7e-17 Identities = 177/252 (70%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 ||| || || ||||||||| || || || ||||| |||||||| | ||| | | ||| Sbjct 5162316 ACGTTGGATGTAACCAGTTTCAGCGGTCTTGACAGCGGTATCAATCAAACCTTCTCTACC 5162257 Query 302655 ACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 | |||| || |||||||| | ||| | |||| | | | | |||| ||| | ||| Sbjct 5162256 AGCCATGGCGTGGAAGAAAAACTCGGTGGGGGTCAAACCACGCAGATAA--GAGTTTTCA 5162199 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 || || ||||| | ||||| || | ||| |||||| ||||| |||| ||| | || | Sbjct 5162198 ACAAATCCACGGGATTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGCAAGGTACGGTAC 5162139 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCAT 302831 | | ||| | || ||||||||||| || || ||| ||||| | ||| | | |||| Sbjct 5162138 TTGAATCCGAAAGGAATACGCTTTCCTTCGACTGACTGTTGTCCGA-CCACAGCAGTCAT 5162080 Query 302832 CTGCGAAATATT 302843 ||| ||||| || Sbjct 5162079 CTGGGAAATGTT 5162068 Score = 100 bits (110), Expect = 8e-16 Identities = 107/141 (76%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||| | | ||| |||||||| ||| ||||| ||| |||| |||||||| Sbjct 5163114 CAAAATTTCCTTTAGACGAGGAACACCCAAGGTGACGTT---CTTAGACGAGACACCAGC 5163058 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 |||||||||||| ||||| || | || || | |||||||||||| || || |||| Sbjct 5163057 AAAGTGGAAAGTGTTCAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGAGCAGCAAG 5162998 Query 301932 CATACCAACCATTTCTCCTGG 301952 || |||||||||||| || || Sbjct 5162997 CACACCAACCATTTCGCCAGG 5162977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816939981795