Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq10 143 3e-28 seq3 129 7e-24 seq7 127 2e-23 seq5 122 1e-21 >seq10 Length=610536 Score = 143 bits (158), Expect = 3e-28 Identities = 177/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||| ||| ||| || ||||||||||| ||| | ||||||||| Sbjct 109804 GCCTTCTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATC 109863 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||| | | ||||||| ||| | | || || | | | Sbjct 109864 GACTCCATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCCAAGGGCCACC 109923 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||||||||| ||||| |||||||||||||||||||| || | ||||||||| | Sbjct 109924 AACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGC 109983 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | || ||| ||||| | ||| || ||||||||||||||||| Sbjct 109984 AGAGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATG 110043 Query 868931 AT 868932 || Sbjct 110044 AT 110045 Score = 118 bits (130), Expect = 1e-20 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | || ||| Sbjct 110455 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGACCTGG 110514 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||| ||||| Sbjct 110515 ACCTCGCCGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 110574 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || ||||| ||| |||| ||||||||||||| | | ||| ||||| | Sbjct 110575 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 110634 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | || || | |||||||||||||||| |||||||||||||| ||| Sbjct 110635 TGCAAATCCTTGGAAAGATCAATTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 110694 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 110695 TACATCTGCCA 110705 Score = 95.1 bits (104), Expect = 1e-13 Identities = 140/195 (72%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || || ||| ||| | |||||| |||| || || |||||||| || ||||| Sbjct 110118 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 110177 Query 869239 CTTGAGCCAAAAGATG---GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295 ||||||||| |||||| ||| || || || ||||| || || ||||| ||||| || Sbjct 110178 CTTGAGCCAGAAGATGGAAGCGAAGGAA---CCGGAGAAGAAAATACCCTCCACGGCAGC 110234 Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 || | | ||| |||| || ||| || || |||| | | ||||||||| || || Sbjct 110235 GAAAGCAACGAGACGCTGAGCGAAG--GTAGATTCCCT-GTCCTGGATCCACTTGATGGC 110291 Query 869356 CCAGTCGGCCTTTTT 869370 ||| |||||||| || Sbjct 110292 CCAATCGGCCTTCTT 110306 >seq3 Length=4809046 Score = 129 bits (142), Expect = 7e-24 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||| || || || |||||| || ||||| || | || || || ||| Sbjct 1225346 GACAGCATCGGCGGTACCGTCACCTGCGTGATCCGTAACGTCCCCGTCGGTCTGGGTGAG 1225287 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| |||||||||||||||||| ||||| |||||| Sbjct 1225286 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 1225227 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||||| ||| ||| || Sbjct 1225226 AAGGGCTTCGAGATCGGCTCCGGCTT 1225201 >seq7 Length=3194316 Score = 127 bits (140), Expect = 2e-23 Identities = 97/115 (84%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||||||||||| ||| ||| || ||| | || |||||| |||| || ||| Sbjct 751804 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGATGTCGGATGCAAGACTGTCGCAAAC 751745 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 751744 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 751690 >seq5 Length=3972810 Score = 122 bits (134), Expect = 1e-21 Identities = 207/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| ||||| || ||||| || || || |||||||| Sbjct 1661392 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGA 1661451 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| ||| | | || | |||| || | || Sbjct 1661452 GGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACC 1661511 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || ||||||| ||||||||| | ||||| || || ||||||||||| || || Sbjct 1661512 GATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTC 1661571 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||| || | | || || || | || || Sbjct 1661572 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACC 1661631 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| ||| | | ||||| || |||||| Sbjct 1661632 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGT 1661691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136327736095