Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq10 143 3e-28
seq3 129 7e-24
seq7 127 2e-23
seq5 122 1e-21
>seq10
Length=610536
Score = 143 bits (158), Expect = 3e-28
Identities = 177/242 (73%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || ||||| ||| ||| || ||||||||||| ||| | |||||||||
Sbjct 109804 GCCTTCTGGTAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATC 109863
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||| | | ||||||| ||| | | || || | | |
Sbjct 109864 GACTCCATGAAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTGCCAAGGGCCACC 109923
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
| ||||||||| ||||| |||||||||||||||||||| || | ||||||||| |
Sbjct 109924 AACAGGCGGTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGC 109983
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || ||||| | || ||| ||||| | ||| || |||||||||||||||||
Sbjct 109984 AGAGCACAGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATG 110043
Query 868931 AT 868932
||
Sbjct 110044 AT 110045
Score = 118 bits (130), Expect = 1e-20
Identities = 178/251 (71%), Gaps = 3/251 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||| ||||| ||| | |||| | || |||
Sbjct 110455 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGACCTGG 110514
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || || | ||||||||| || ||||| ||| ||| |||||
Sbjct 110515 ACCTCGCCGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 110574
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809
|| || || ||||| ||| |||| ||||||||||||| | | ||| ||||| |
Sbjct 110575 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 110634
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | || || | |||||||||||||||| |||||||||||||| |||
Sbjct 110635 TGCAAATCCTTGGAAAGATCAATTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 110694
Query 869870 TACATCTCCCA 869880
||||||| |||
Sbjct 110695 TACATCTGCCA 110705
Score = 95.1 bits (104), Expect = 1e-13
Identities = 140/195 (72%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||| | |||||| |||| || || |||||||| || |||||
Sbjct 110118 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCACGCTT 110177
Query 869239 CTTGAGCCAAAAGATG---GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295
||||||||| |||||| ||| || || || ||||| || || ||||| ||||| ||
Sbjct 110178 CTTGAGCCAGAAGATGGAAGCGAAGGAA---CCGGAGAAGAAAATACCCTCCACGGCAGC 110234
Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355
|| | | ||| |||| || ||| || || |||| | | ||||||||| || ||
Sbjct 110235 GAAAGCAACGAGACGCTGAGCGAAG--GTAGATTCCCT-GTCCTGGATCCACTTGATGGC 110291
Query 869356 CCAGTCGGCCTTTTT 869370
||| |||||||| ||
Sbjct 110292 CCAATCGGCCTTCTT 110306
>seq3
Length=4809046
Score = 129 bits (142), Expect = 7e-24
Identities = 116/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
|||||||||||||| || || || |||||| || ||||| || | || || || |||
Sbjct 1225346 GACAGCATCGGCGGTACCGTCACCTGCGTGATCCGTAACGTCCCCGTCGGTCTGGGTGAG 1225287
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| |||||||| |||||||||||||||||| ||||| ||||||
Sbjct 1225286 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 1225227
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192
||||| |||||||| ||| ||| ||
Sbjct 1225226 AAGGGCTTCGAGATCGGCTCCGGCTT 1225201
>seq7
Length=3194316
Score = 127 bits (140), Expect = 2e-23
Identities = 97/115 (84%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||| |||||||||||||| ||| ||| || ||| | || |||||| |||| || |||
Sbjct 751804 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGATGTCGGATGCAAGACTGTCGCAAAC 751745
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||||||| || || ||||||||||||||||| |||||| || |||
Sbjct 751744 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 751690
>seq5
Length=3972810
Score = 122 bits (134), Expect = 1e-21
Identities = 207/300 (69%), Gaps = 0/300 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| | || |||| ||| ||||| || ||||| || || || ||||||||
Sbjct 1661392 CTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGA 1661451
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || | | ||||| ||| | | || | |||| || | ||
Sbjct 1661452 GGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACC 1661511
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || ||||||| ||||||||| | ||||| || || ||||||||||| || ||
Sbjct 1661512 GATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTC 1661571
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| |||||||||| ||||| ||||| || | | || || || | || ||
Sbjct 1661572 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACC 1661631
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|||||||| || || || | || ||||| ||| | | ||||| || ||||||
Sbjct 1661632 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGT 1661691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136327736095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |