Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq5 152 5e-32 >seq5 Length=3972810 Score = 152 bits (168), Expect = 5e-32 Identities = 472/716 (66%), Gaps = 27/716 (4%) Strand=Plus/Plus Query 139306 TACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT 139364 ||||| |||||||| ||||||| |||| |||||||| | |||| | | | | ||| Sbjct 1661135 TACTTCTCGTAGAGAGCGTCGAACTCGT-CACCGTAGACATCAGCCA-AGCCAGGGGCTT 1661192 Query 139365 -GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423 || || || | || | ||| | |||||||||| || ||| ||||||||||||||| Sbjct 1661193 CGTTGGGGCAGAACAGGGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCG 1661252 Query 139424 GAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCT--TCCGAACCCATGTTACG 139481 | |||||| ||| | | || ||| || || ||| | || ||| ||| ||| Sbjct 1661253 GGGTCCACAGGGCGTAGAACAGATCACGAGC--TCTGACCTCCTCCTTACCGTGGTTC-- 1661308 Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 || | | | ||||| ||||| || || | |||||| || || || |||||||| | | Sbjct 1661309 TTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAT 1661368 Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||| ||||| || || |||| || ||| || ||||| || || Sbjct 1661369 GCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGA 1661428 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCG 139652 | ||| || | |||||| | | || |||||||| | || ||| ||| | || Sbjct 1661429 AGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGT---- 1661484 Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712 || |||| | || || || | ||||| || ||| | ||||| || | | |||| Sbjct 1661485 AGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCA 1661544 Query 139713 ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772 | || ||||| ||||| |||||||| |||| ||| ||| || ||||| Sbjct 1661545 GGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCA 1661604 Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 || | || || || | || || || |||||||| || ||||| ||||| Sbjct 1661605 AGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA 1661664 Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892 | | |||||||| | ||| || |||||||| || |||| || || |||||||| Sbjct 1661665 GTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGGAT 1661724 Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952 ||| || | || |||||||||| || ||| || || |||||| || | ||| Sbjct 1661725 ACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCG 1661784 Query 139953 tttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||| || |||| ||| | |||||| | || ||| | | ||||||||||| Sbjct 1661785 CAACAGGTAGGACCG--CTCCAAAGTCTTGAAACCGAAGAAGTTGTAGTTGAAATC 1661838 Score = 132 bits (146), Expect = 4e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | ||||| ||| | || Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| || || ||| |||||||| ||||| || || || || || Sbjct 3010638 GACACCATCGATAACGTTAAGACCAA-GATTCAAGACAAGGAAGGCATTCCCCCGGACCA 3010580 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || |||||||||||||| || || |||||||||||| | | | |||| || || || Sbjct 3010579 GCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAA 3010520 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 |||||| ||||||||||| || ||| Sbjct 3010519 CATTCAGAAGGAATCGACCCTTCAC 3010495 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 ||||| || || || || ||||| || || | | ||| || | || |||| ||| || Sbjct 3011204 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAACGTTAAGACC 3011145 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || |||||| ||||| || || || |||||||| || || ||| ||||||| || || || Sbjct 3011144 AA-GATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTGGAAA 3011086 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 |||||||||||| | | | |||| || || ||||| || ||||| || || || || Sbjct 3011085 GCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTCTACTCTCCA 3011026 Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930 | | || | || |||| || || Sbjct 3011025 CCTCGTTCTCCGCCTGCGTGGTGG 3011002 Score = 93.3 bits (102), Expect = 4e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || ||||| || || || || || | | ||||| | || | Sbjct 3010911 AAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCGACAAT 3010852 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||| || ||||| || || || |||||||| || || ||| | ||||| Sbjct 3010851 GTGAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTC 3010792 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || |||||||||||| | | | |||| || || ||||| ||||||||||| Sbjct 3010791 GCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAATCC 3010732 Query 24899 ACACTACAC 24907 || || ||| Sbjct 3010731 ACTCTTCAC 3010723 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || |||||||| || || || | | Sbjct 3010470 ATGCAGATCTTCGTGAAGACACTCACCGGCAAGACGATTACGCTAGAGGTGGAGAGCTCG 3010411 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || | ||||||||||| || || || || || || ||||| Sbjct 3010410 GATACTATTGATAACGTCAAGAACAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCAG 3010351 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || || || || |||||||| ||| | | | || || || ||| Sbjct 3010350 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACAAC 3010291 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || ||||||||| Sbjct 3010290 ATCCAGAAGGAGAGCACTCTGCACTTGGTG 3010261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897403169800