Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq5 152 5e-32
>seq5
Length=3972810
Score = 152 bits (168), Expect = 5e-32
Identities = 472/716 (66%), Gaps = 27/716 (4%)
Strand=Plus/Plus
Query 139306 TACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT 139364
||||| |||||||| ||||||| |||| |||||||| | |||| | | | | |||
Sbjct 1661135 TACTTCTCGTAGAGAGCGTCGAACTCGT-CACCGTAGACATCAGCCA-AGCCAGGGGCTT 1661192
Query 139365 -GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423
|| || || | || | ||| | |||||||||| || ||| |||||||||||||||
Sbjct 1661193 CGTTGGGGCAGAACAGGGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCG 1661252
Query 139424 GAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCT--TCCGAACCCATGTTACG 139481
| |||||| ||| | | || ||| || || ||| | || ||| ||| |||
Sbjct 1661253 GGGTCCACAGGGCGTAGAACAGATCACGAGC--TCTGACCTCCTCCTTACCGTGGTTC-- 1661308
Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539
|| | | | ||||| ||||| || || | |||||| || || || |||||||| | |
Sbjct 1661309 TTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAAT 1661368
Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596
|| || || ||| ||||| || || |||| || ||| || ||||| || ||
Sbjct 1661369 GCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGA 1661428
Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCG 139652
| ||| || | |||||| | | || |||||||| | || ||| ||| | ||
Sbjct 1661429 AGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGT---- 1661484
Query 139653 AGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA 139712
|| |||| | || || || | ||||| || ||| | ||||| || | | ||||
Sbjct 1661485 AGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCA 1661544
Query 139713 ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772
| || ||||| ||||| |||||||| |||| ||| ||| || |||||
Sbjct 1661545 GGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCA 1661604
Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832
|| | || || || | || || || |||||||| || ||||| |||||
Sbjct 1661605 AGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA 1661664
Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892
| | |||||||| | ||| || |||||||| || |||| || || ||||||||
Sbjct 1661665 GTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGGAT 1661724
Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952
||| || | || |||||||||| || ||| || || |||||| || | |||
Sbjct 1661725 ACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCG 1661784
Query 139953 tttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||| || |||| ||| | |||||| | || ||| | | |||||||||||
Sbjct 1661785 CAACAGGTAGGACCG--CTCCAAAGTCTTGAAACCGAAGAAGTTGTAGTTGAAATC 1661838
Score = 132 bits (146), Expect = 4e-26
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || | ||||| ||| | ||
Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| ||| || || ||| |||||||| ||||| || || || || ||
Sbjct 3010638 GACACCATCGATAACGTTAAGACCAA-GATTCAAGACAAGGAAGGCATTCCCCCGGACCA 3010580
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| |||||||||||||| || || |||||||||||| | | | |||| || || ||
Sbjct 3010579 GCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAA 3010520
Query 24883 CATTCAAAAGGAATCGACACTACAC 24907
|||||| ||||||||||| || |||
Sbjct 3010519 CATTCAGAAGGAATCGACCCTTCAC 3010495
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786
||||| || || || || ||||| || || | | ||| || | || |||| ||| ||
Sbjct 3011204 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAACGTTAAGACC 3011145
Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846
|| |||||| ||||| || || || |||||||| || || ||| ||||||| || || ||
Sbjct 3011144 AA-GATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTGGAAA 3011086
Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
|||||||||||| | | | |||| || || ||||| || ||||| || || || ||
Sbjct 3011085 GCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTCTACTCTCCA 3011026
Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930
| | || | || |||| || ||
Sbjct 3011025 CCTCGTTCTCCGCCTGCGTGGTGG 3011002
Score = 93.3 bits (102), Expect = 4e-14
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || ||||| || ||||| || || || || || | | ||||| | || |
Sbjct 3010911 AAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCGACAAT 3010852
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || ||||| || ||||| || || || |||||||| || || ||| | |||||
Sbjct 3010851 GTGAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATCTTC 3010792
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || |||||||||||| | | | |||| || || ||||| |||||||||||
Sbjct 3010791 GCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAATCC 3010732
Query 24899 ACACTACAC 24907
|| || |||
Sbjct 3010731 ACTCTTCAC 3010723
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || |||||||| || || || | |
Sbjct 3010470 ATGCAGATCTTCGTGAAGACACTCACCGGCAAGACGATTACGCTAGAGGTGGAGAGCTCG 3010411
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || | ||||||||||| || || || || || || |||||
Sbjct 3010410 GATACTATTGATAACGTCAAGAACAAGATCCAAGATAAGGAGGGCATTCCCCCGGATCAG 3010351
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | || || || || || |||||||| ||| | | | || || || |||
Sbjct 3010350 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACAAC 3010291
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || |||||||||
Sbjct 3010290 ATCCAGAAGGAGAGCACTCTGCACTTGGTG 3010261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897403169800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |