Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 4e-18
seq2 96.9 2e-15
seq1 93.3 3e-14
>seq5
Length=3972810
Score = 105 bits (116), Expect = 4e-18
Identities = 147/204 (72%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||| || ||||| ||||| || ||| | || ||||
Sbjct 3010715 AGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 3010774
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| |||||||| |||||||| || || |||||||| | || | |||||||||||
Sbjct 3010775 TCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3010834
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| ||| | ||| || |||| ||| ||
Sbjct 3010835 TGAATCTTGGTCTTCAC--AT--TGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGAT 3010890
Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965
|||||||| || |||||||| ||
Sbjct 3010891 AGTCTTTCCGGTCAGGGTCTTGAC 3010914
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||||||||||||| ||||| ||||| || || | || ||||
Sbjct 3010259 AGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCT 3010318
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || ||||| || || || ||||| || | || | |||||||| ||
Sbjct 3010319 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCT 3010378
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || | |||||| | || | || | ||| || || | || || |||
Sbjct 3010379 TGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTC 3010438
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 3010439 TTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| |||||||||||||| ||||| || | | | || ||||
Sbjct 3010487 AGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCC 3010546
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || ||||||| || |||||||| | || | || ||||||||
Sbjct 3010547 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC- 3010605
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
|| | | || || | | | | ||||||| || | || || || | || ||
Sbjct 3010606 TTGAATCTTGGTCTTA---ACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGAT 3010662
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||||||| || ||||| || |||||||||||
Sbjct 3010663 CGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698
Score = 100 bits (110), Expect = 2e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| ||||| || ||| | || |||| ||||| |||||||| |||||
Sbjct 3011037 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAA 3011096
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||||| || |||||||| | || | ||||||||||| | || || || |||
Sbjct 3011097 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTT 3011156
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955
| || | || | | |||||| || | ||| |||||||| || ||||
Sbjct 3011157 GTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGA 3011206
>seq2
Length=4967832
Score = 96.9 bits (106), Expect = 2e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| ||| |||| |||| || || ||||| || |||||||
Sbjct 3524091 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3524032
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| || || ||||| || | || | ||||||||||| | || || ||||||
Sbjct 3524031 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 3523972
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | |||||| || | ||| |||||||| |||||||||||||| || |
Sbjct 3523971 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 3523912
Query 34968 A 34968
|
Sbjct 3523911 A 3523911
>seq1
Length=6182763
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||||||||| ||||| |||||||| || | || | ||
Sbjct 4512396 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 4512455
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 4512456 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTC 4512514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692661071665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |