Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 9e-11 >seq4 Length=4068578 Score = 84.2 bits (92), Expect = 9e-11 Identities = 120/167 (72%), Gaps = 13/167 (8%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| |||||||| || |||||||| |||||||||||| | ||| Sbjct 1005501 CTCGATCAAGTGCGCGATTGTCATACGGGAGGGAATGGCGTGAGGGTTGATGATCAAGTC 1005442 Query 309744 AGGTCTCA----TTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAA 309798 ||| | || ||| | | |||||||||| ||||| | | |||| | | | | Sbjct 1005441 AGGGCACACACCCTCCCGAG-------TGAAAGGCATGTCTTCCTGACGGTA-AGTGATA 1005390 Query 309799 CCAATAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || || || |||||||| |||| | || || |||||||| ||||| Sbjct 1005389 CCGATGGTACCCTTTTGTCCGTGACGAGAGGCGAACTTGTCTCCAAT 1005343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951973524661480