Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq10 86.0 6e-12 >seq10 Length=610536 Score = 86.0 bits (94), Expect = 6e-12 Identities = 166/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 50489 GGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGT 50548 |||||| || || ||||||| ||| || | ||||| | || |||||| | ||| Sbjct 110049 GGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTG 109990 Query 50549 GGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAG 50608 || || ||||||||||| | | |||||||| ||||||| ||||| || || ||| | Sbjct 109989 TGCTCTGCTGGGCATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCG 109930 Query 50609 ATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATG-CACGTAACCCCTTTCCGTTT 50666 ||||| || || || |||| ||| ||||| || | |||| |||||||| || Sbjct 109929 CCTGTTGGTGGCCCTTGG-CAACAAGAAGTACTACAACGCCACG-AACCCCTTCGACTTC 109872 Query 50667 ATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726 ||| | || ||| ||| ||| || || ||||| || || | || || || || ||| Sbjct 109871 ATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTAC 109812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543786262000