Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 2e-12 seq10 84.2 2e-11 seq1 82.4 7e-11 >seq5 Length=3972810 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||||||||||||| || |||||| ||| || ||||| ||||| | | Sbjct 3010505 GATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCA 3010564 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | |||||| || || || || |||||||| || || | | | || || | ||| Sbjct 3010565 AAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 3010623 Query 132050 -TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | || | || |||| | || ||||| | || | ||| || || || ||||| || Sbjct 3010624 GTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTT 3010683 Query 132109 TATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 3010684 GACGAAGATCTGCAT 3010698 >seq10 Length=610536 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105 ||||| || |||| || ||||||| | |||| || |||||| || |||||||| Sbjct 110036 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGC 109977 Query 47106 ATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 47165 |||||| | || |||||| | || || ||||| || ||||| || ||||||||| Sbjct 109976 ATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCC 109917 Query 47166 CTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTC 47224 || || |||| ||| || | || || || || || || || ||| | || || Sbjct 109916 CTTGG-CAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTC 109858 Query 47225 GCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 ||| | ||| || ||||| || || ||||| || || || || || Sbjct 109857 GCTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTA 109813 >seq1 Length=6182763 Score = 82.4 bits (90), Expect = 7e-11 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 51741 TTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGG-AGCGCCGTGGTCGCTGCCGGT 51799 ||||| | ||| || ||||| ||| ||| || |||| ||| |||||| ||||| Sbjct 808733 TTGCCAAGGTCACCAACGTGACGC-TCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 808791 Query 51800 GGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 51859 |||||||||||| || || || |||||||||||| || |||| ||||| | ||| || Sbjct 808792 GGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 808851 Query 51860 GTGGAATCC 51868 |||||| || Sbjct 808852 GTGGAAGCC 808860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610991482600