Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq5 87.8 2e-12
seq10 84.2 2e-11
seq1 82.4 7e-11
>seq5
Length=3972810
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || || ||||||||||||||| || |||||| ||| || ||||| ||||| | |
Sbjct 3010505 GATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCA 3010564
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | |||||| || || || || |||||||| || || | | | || || | |||
Sbjct 3010565 AAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 3010623
Query 132050 -TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108
| || | || |||| | || ||||| | || | ||| || || || ||||| ||
Sbjct 3010624 GTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTT 3010683
Query 132109 TATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 3010684 GACGAAGATCTGCAT 3010698
>seq10
Length=610536
Score = 84.2 bits (92), Expect = 2e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105
||||| || |||| || ||||||| | |||| || |||||| || ||||||||
Sbjct 110036 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGC 109977
Query 47106 ATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 47165
|||||| | || |||||| | || || ||||| || ||||| || |||||||||
Sbjct 109976 ATGAACTCTAAGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCC 109917
Query 47166 CTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTC 47224
|| || |||| ||| || | || || || || || || || ||| | || ||
Sbjct 109916 CTTGG-CAACAAGAAGTACTACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTC 109858
Query 47225 GCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
||| | ||| || ||||| || || ||||| || || || || ||
Sbjct 109857 GCTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTA 109813
>seq1
Length=6182763
Score = 82.4 bits (90), Expect = 7e-11
Identities = 97/129 (75%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 51741 TTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGG-AGCGCCGTGGTCGCTGCCGGT 51799
||||| | ||| || ||||| ||| ||| || |||| ||| |||||| |||||
Sbjct 808733 TTGCCAAGGTCACCAACGTGACGC-TCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 808791
Query 51800 GGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 51859
|||||||||||| || || || |||||||||||| || |||| ||||| | ||| ||
Sbjct 808792 GGGGTTGAAGTGAGGACCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 808851
Query 51860 GTGGAATCC 51868
|||||| ||
Sbjct 808852 GTGGAAGCC 808860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610991482600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |